KEGG   Ideonella dechloratans: LRM40_06090
Entry
LRM40_06090       CDS       T07737                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
idc  Ideonella dechloratans
Pathway
idc00740  Riboflavin metabolism
idc01100  Metabolic pathways
idc01110  Biosynthesis of secondary metabolites
idc01240  Biosynthesis of cofactors
idc02024  Quorum sensing
Module
idc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:idc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LRM40_06090 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LRM40_06090 (ribD)
Enzymes [BR:idc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LRM40_06090 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LRM40_06090 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UFU11244
LinkDB
Position
complement(1290727..1291866)
AA seq 379 aa
MPQPSSLVFTPQDAVFMARAQALSESAVGLTEPNPRVGCVITSEDGQLLGEGHTQPAGQA
HAEVMALRDAAARGHEVRGATAYVTLEPCAHHGRTPPCCDALVAAGVARVVVAAGDPNPL
VNGQGLARLRAAGVTVVNSPPEHAVAAEELNVGFFHRMRTGRAWVRLKVAASLDGRTALD
NGVSQWITGPDARRDGHAWRRRAGALLTGVGTVLADDPRLDVRLVDTPRQPLRAVVDARL
DTPPSARLFEADGPLVFYVAHPDPARQAAIADRGAEIVALPGAAGRVDLAAVLADLSSRP
LNELHIEAGPRLNGSLIAADLVDECLVYLAPLLLGQGRGMAALPTLDALDGAWRYAFHDQ
ARVGDDLRLLLRRRAATPT
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgccccagccttcttccctcgtgttcaccccgcaggacgccgtcttcatggcgcgcgct
caggccctgtcggaatcggcggtcggcctgaccgagccgaatccgcgggtgggctgcgtc
atcacctcggaggacggccagctgctgggcgaaggccacacccagcctgcggggcaggcc
cacgcggaagtgatggccctgcgagacgccgccgcccggggccacgaggtgcgcggcgcc
accgcctatgtgaccctggagccctgcgcccaccatggccgcaccccgccctgctgcgac
gccctggtggccgccggcgtggctcgcgtggtggtggccgcgggcgaccccaaccccctg
gtcaacggccagggcctggcccggctgcgggccgccggcgtcacggtggtcaacagcccc
cccgagcacgcggtggcggcggaagagctcaatgtgggcttcttccaccgcatgcgcacg
gggcgggcctgggtgcgcctgaaggtcgcggcgtccctggatggccgcaccgcgctggac
aacggcgtgagccaatggatcaccggcccggacgcccggcgcgacggccatgcctggcgg
cggcgtgcgggcgccctgctcaccggtgtgggcacggtgctggccgacgacccccggctg
gatgtgcggctggtggacacccccaggcaaccgctgcgcgccgtcgtggatgcccggctc
gacaccccgccctccgcacgtcttttcgaggcggacggcccgctggtgttctatgtcgcc
catcccgacccggcgcgacaggcggccattgccgatcgcggtgccgaaatcgtcgcgctg
ccgggtgccgccggccgggtggatctggcggccgtgcttgccgacctgtcgagccgccct
ctcaacgaactccacatcgaagccggcccgcgcctgaacggcagcctgatcgccgccgac
ctggtggacgagtgcctggtctacttggcgccgctgctcctgggccagggccggggcatg
gccgccctgccgacactggacgcccttgacggcgcctggcgttatgcatttcacgatcag
gcccgcgtcggcgacgatctgcggctgctgctgcgacgccgggcagccacgccgacctga

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