Ideonella dechloratans: LRM40_06140
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Entry
LRM40_06140 CDS
T07737
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
idc
Ideonella dechloratans
Pathway
idc00260
Glycine, serine and threonine metabolism
idc00460
Cyanoamino acid metabolism
idc00630
Glyoxylate and dicarboxylate metabolism
idc00670
One carbon pool by folate
idc00680
Methane metabolism
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
idc01230
Biosynthesis of amino acids
idc01240
Biosynthesis of cofactors
idc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRM40_06140
09102 Energy metabolism
00680 Methane metabolism
LRM40_06140
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRM40_06140
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LRM40_06140
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LRM40_06140
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LRM40_06140
Enzymes [BR:
idc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LRM40_06140
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UFU11252
LinkDB
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Position
complement(1300220..1301470)
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AA seq
416 aa
AA seq
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MFDRSQSTIANVDPDLWAAIQAENKRQEEHIELIASENYTSPAVMQAQGSQLTNKYAEGY
PGKRYYGGCENVDVVEQLAIDRVKRLFGANFANVQPNSGSQANQAVFFGLLQPGDTIMGM
SLAEGGHLTHGMPLNMSGKWFKVVSYGLDANEDIDYAAMEALAREHKPKLIIAGASAFAL
RIDFERFAKIAKEIGAYFMVDMAHYAGLVAAGVYPNPVPHADVVTSTTHKSLRGPRGGII
LMNNEDVAKKINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEQVVKNAKVLAET
LISRGLRIVSGRTESHVMLVDLRPKGLTGKEAEAILGAAHMTCNKNGIPNDPQKPMVTSG
IRLGTPAMTTRGFKEEQVRATAHLIADVLDNPHDEANIARVREQVAALTRDFPVYR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccgttcccaatcgacgatcgccaacgtcgaccccgacctgtgggccgccatc
caggccgaaaacaagcgccaggaagagcacatcgagctcatcgcctcggaaaactacacc
tcgccggccgtgatgcaggcgcagggcagccagctgaccaacaagtacgccgaaggctat
cccggcaagcgctactacggcggctgcgagaacgtggacgtggtcgagcaactggccatc
gaccgcgtcaagcgactcttcggcgccaacttcgccaacgtgcaacccaactcgggttcc
caggccaaccaggccgtgttcttcggcctgctgcagcccggcgacaccatcatgggcatg
agcctggccgaaggcggccacctgacccacggcatgccgctgaacatgtccggcaagtgg
ttcaaggtcgtcagctacggcctggatgccaacgaggacatcgactacgccgccatggaa
gccctggcgcgcgagcacaagcccaagctgatcatcgccggcgcctcggccttcgccctg
cgcatcgacttcgagcgctttgccaagatcgccaaggaaatcggcgcctacttcatggtg
gacatggcccactacgccggcttggtggctgcgggcgtctacccgaacccggtgccgcat
gccgacgtggtgacctccaccacccacaagagcctgcgcggcccgcgtggcggcatcatc
ctgatgaacaacgaggatgtggccaagaagatcaactcggccatcttccctggcatccag
ggcggcccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagccctgagc
cccgagttcaaggcttaccaggaacaggtggtcaagaacgccaaggtgctggccgagacc
ctgatctcgcgcggcctgcgcatcgtcagtggccgcaccgaaagccacgtgatgctggtg
gacctgcgccccaagggcctgaccggcaaggaagccgaggccatcctgggcgccgcccac
atgacctgcaacaagaacggcatccccaacgatccgcagaagccgatggtgaccagcggc
atccgactgggcaccccggccatgaccacccgcggcttcaaggaagagcaggtgcgtgcc
accgcccacctgatcgccgacgtgctggacaacccgcacgacgaggcgaacatcgcccgt
gtgcgtgagcaggtcgcggcgctgacccgcgacttcccggtctaccgctga
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