Ideonella dechloratans: LRM40_07905
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Entry
LRM40_07905 CDS
T07737
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
idc
Ideonella dechloratans
Pathway
idc00020
Citrate cycle (TCA cycle)
idc00190
Oxidative phosphorylation
idc00650
Butanoate metabolism
idc00720
Other carbon fixation pathways
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
Module
idc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
idc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
idc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRM40_07905 (sdhA)
00650 Butanoate metabolism
LRM40_07905 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LRM40_07905 (sdhA)
00720 Other carbon fixation pathways
LRM40_07905 (sdhA)
Enzymes [BR:
idc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LRM40_07905 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
NAD_binding_7
NAD_binding_8
Lycopene_cycl
FimA-like_C
FAD_oxidored
ThiF
Motif
Other DBs
NCBI-ProteinID:
UFU11579
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Position
1696045..1697853
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AA seq
602 aa
AA seq
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MAQTNNISKRKFDVVIVGAGGSGMRASLQLAKAGLNVAVLSKVFPTRSHTVAAQGGIGAS
LGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNADGTIYQ
RPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVRARTNFFVEWMALDLIRDADGD
VVGVTALELETGDIHILEAKIVLLATGGAGRIFQASTNAFINTGDGLGMAARAGIPLQDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILRNANGERFMERYAPTLKDLAPRDFVSRCMDQE
IKEGRGCGPNKDYVVLDMTHLGADTILKRLPSVFEIGHNFANVDITKEPIPVVPTIHYQM
GGIPTNIHGQVSVPKGDDHRSPIPGLYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVESLKNEPKAHKPLPADAADKTLARLARLESSTSGEYAQTVANDLRACMQSHAGVFRT
QALMDEGVIRIAEIRERVKNITLKDKSKVWNTARMEALEVDNLIEAAQATMVSAAARKEC
RGAHTVNDYERGADDAEFPLGRNDKEWMKHTLWDSASNSLSYKPVNLKPLTVDSVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaccaacaatatttccaagcgcaagttcgacgtcgtcatcgtcggtgccggt
ggttccggcatgcgcgcctcgctgcaactggccaaggctggcctgaacgtggcggttctg
tccaaggtgttcccgacccgttcgcacacggtggcggcccagggcggcatcggtgcctcg
ctgggcaacatgtccgaggacaactggcactaccacttctacgacaccatcaagggctcg
gactggctgggtgaccaggacgccatcgagttcatgtgccgtgaagcacccaaggtcgtc
tacgagttggagcacttcggcatgccgttcgaccgcaatgcggacggcaccatctaccag
cgccccttcggcggccacaccgccaactacggcgagaagccggtgcagcgcgcctgcgcc
gcggccgaccgcaccggccatgccctgctgcacaccctgtaccagcagaacgtgcgcgcc
cgcaccaacttcttcgtcgagtggatggcgctggacctgatccgcgacgccgacggcgac
gtggtgggcgtgaccgcgctggaactggaaaccggcgatatccatatcctcgaagccaag
atcgtgctgctggccaccggtggtgccggccgcatcttccaggcctcgaccaacgccttc
atcaacaccggtgacggcctgggcatggcggcacgcgccggcatcccgctgcaggacatg
gagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgctgaccgaaggc
tgccgcggcgaaggcgccatcctgcgcaacgccaatggcgagcgcttcatggaacgctac
gctccgacactgaaggacctggcgccgcgcgacttcgtctcgcgctgcatggaccaggaa
atcaaggaaggtcgcggctgcggtcccaacaaggactacgtggtcctggacatgacccat
ctgggggcggacaccatcctcaagcgcctgccctcggtgttcgagattggccacaacttc
gccaacgtcgacatcaccaaggagccgatcccggtggtgccgaccatccattaccagatg
ggcggcatcccgaccaacatccacggccaggtgtcggtgcccaagggcgacgaccatcgc
agccccatcccgggtttgtatgccgtgggcgagtgctcctgtgtgtcggtgcacggcgcc
aaccgcctgggcaccaactcgctgctggacctggtggtcttcggccgcgccgcgggcaac
cacatcgtcgagtcgctcaagaacgagcccaaggcccacaagccgctgccggccgatgcg
gccgacaagaccctggcccgcctggcgcgcctggagtccagcacctccggcgagtacgcg
cagaccgtggcgaacgacctgcgtgcctgcatgcagtcgcacgccggcgtgttccgtacc
caggccctgatggacgagggcgtgatccgcatcgccgagatccgcgagcgcgtgaagaac
atcaccctcaaggacaagtccaaggtctggaacaccgcccgcatggaagcgctggaggtc
gacaacctgatcgaggccgcccaggccacgatggtgtcggccgccgcccgcaaggaatgc
cgtggtgcccacaccgtgaacgactacgagcgtggtgccgacgacgccgagttcccgctg
ggccgcaacgacaaggaatggatgaagcacaccctgtgggacagcgcctcgaacagcctg
tcctacaagccggtgaacctcaagccgctcaccgtcgacagcgtgccgcccaaggtccgc
accttctga
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