Ideonella dechloratans: LRM40_07940
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Entry
LRM40_07940 CDS
T07737
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
idc
Ideonella dechloratans
Pathway
idc00280
Valine, leucine and isoleucine degradation
idc00630
Glyoxylate and dicarboxylate metabolism
idc00640
Propanoate metabolism
idc00720
Other carbon fixation pathways
idc01100
Metabolic pathways
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
idc04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRM40_07940 (scpA)
00640 Propanoate metabolism
LRM40_07940 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
LRM40_07940 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LRM40_07940 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
LRM40_07940 (scpA)
Enzymes [BR:
idc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
LRM40_07940 (scpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
RE_Eco29kI
Motif
Other DBs
NCBI-ProteinID:
UFU11585
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Position
1702978..1705131
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AA seq
717 aa
AA seq
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MSNPNEFKSANLEQWAQAAAKSAGGDLAKLNWRTPEGIEVKPLYTADDIASLPYANTLPG
FEPFIRGPQATMYAVRPWTIRQYAGFSTAEESNAFYRKALAAGGQGVSVAFDLATHRGYD
SDHPRVTGDVGKAGVAIDSVEDMKILFDGIPLDKISVSMTMNGAVLPVLAGYVVAAEEQG
VPQDKLSGTIQNDILKEFMVRNTYIYPPEPSMKIIGDIIEYTSQNMPKFNSISISGYHMQ
EAGANQALELAFTLADGKEYVKTAIAKGLDVDDFAGRLSFFWAVGMNFYLEIAKMRAARL
LWCRIMKGFNAKNPKSLMLRTHSQTSGWSLTEQDPYNNVVRTTIEAMAAVFGGTQSLHTN
SLDEAIALPTEFSARIARNTQLIIQEETHITNVVDPWAGSYMMETLTQQMADKAWAIIEE
VEAMGGMTKAVDSGWAKLKIEASAAEKQARIDSGKDVIVGVNKYKLAKEDPVEILEVDNV
KVRESQIARLKQIKATRDNAKVQSALDALTACAQSGQGNLLDLSIQAIRLRATVGEVSDA
LEKVFGRHRADIQKVTGVYAAAYDSAEGWEKLKGEIDAFAEETGRRPRVMIAKLGQDGHD
RGAKVVATAFADLGFDVDMGPLFQTPEECARQAIENDVHAVGISTLAAGHKTLVPAIIAE
LKKQGADDIIVFVGGVIPAQDYDYLYESGVKGIYGPGTPIPVSAKDVLEQIRSAQKA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaacgaattcaagtccgccaacctcgaacaatgggcccaggccgccgcc
aagtcggccggtggggatctggccaagctcaactggcgcacgcccgagggcatcgaggtc
aagccgctttacaccgcggacgacatcgccagcctgccttacgccaacacgctgccgggc
ttcgaacccttcatccgaggcccgcaggccaccatgtacgcggtgcggccctggaccatc
cgccagtacgccggtttctccaccgccgaggagtccaacgccttctaccgcaaggccctg
gcggctggtggccagggcgtgtcggtggccttcgacctggccacccaccgcggctacgac
agcgaccatccgcgcgtgaccggcgatgtcggcaaggccggcgtggcgatcgactcggtc
gaggacatgaagatcctgttcgacggcattccgctggacaagatctcggtgtcgatgacc
atgaacggcgccgtgctgccggtgctggccggctacgtggtcgccgccgaagagcagggc
gtgccgcaggacaagctgtccgggaccatccagaacgacatcctcaaggagttcatggtc
cgcaacacctacatctacccgccggagccgtcgatgaagatcatcggcgacatcatcgag
tacacgagtcagaacatgcccaagttcaactcgatctcgatctcgggctaccacatgcag
gaagcgggtgccaaccaggcactggagctggccttcacgctggccgacggcaaggagtac
gtgaagaccgccatcgccaagggcctggacgtggacgacttcgcgggccggctgtccttc
ttctgggcggttgggatgaacttctatctcgagatcgccaagatgcgcgcggcccgcctg
ctgtggtgccgcatcatgaagggcttcaacgcgaagaaccccaagagcctgatgctgcgc
acgcacagccagacctcgggctggtcgctgaccgagcaggacccctacaacaacgtggtc
cgcaccaccatcgaggccatggccgcggtgttcggcggcacccagagcctgcacaccaac
tcgctggacgaggccatcgcgctgcccaccgagttctcggcccgcatcgcccgcaacacc
cagctcatcatccaggaagagacccacatcaccaacgtggtggacccctgggccggttcc
tacatgatggagacgctgacccagcagatggccgacaaggcctgggccatcatcgaggag
gtcgaggccatgggcggcatgaccaaggccgtggacagcggctgggccaagctgaagatc
gaggccagcgcggccgagaagcaggcccgcatcgactcgggcaaggacgtcatcgtcggc
gtcaacaagtacaagctggccaaggaggatccggtcgagatcctcgaggtggacaacgtc
aaggtgcgcgagtcccagatcgcccgcttgaagcagatcaaggccacccgcgacaatgcc
aaggtccaatcggccctggacgcgctgaccgcctgcgcccaaagcgggcagggcaacctg
ctcgacctgtcgatccaggccatccgcctgcgcgccaccgtgggtgaggtcagcgatgcg
ctggaaaaggtgtttggccgccaccgtgcggacatccagaaggtgaccggtgtgtacgca
gctgcctatgactcggccgaaggctgggaaaagctcaagggcgagatcgatgccttcgcc
gaggagaccggtcgtcgtccgcgcgtgatgatcgccaagctgggccaggacggtcatgac
cgcggtgccaaggtggtggccacggccttcgccgacctgggcttcgacgtggacatgggc
ccgctgttccagacccccgaggaatgcgcccgccaggccatcgagaacgacgtccacgca
gtgggcatttccacgctggccgccggtcacaagaccttggtgccggccatcatcgccgag
ctgaagaagcagggggccgacgacatcatcgtcttcgtcggtggtgtgatccccgcgcag
gactacgattacctttatgaatccggcgtcaagggcatctacggtcccggcacgcccatc
ccggtcagcgccaaggacgtgctggagcagatccgcagcgcccagaaggcctga
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