Ideonella dechloratans: LRM40_09000
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Entry
LRM40_09000 CDS
T07737
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LRM40_09000
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
DUF460
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UFU08495
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Position
1927571..1929901
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AA seq
776 aa
AA seq
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MDKILLQIAAELKVRPAQVNAAVTLLDGGATVPFIARYRKEATDGLDDIQLRELEARLGY
LRELEERRDAVLKSIDEQGKLTPELRAAIEAAPTKQELEDLYLPYKPKRRTKGMIAREAG
LEPLADKLFADPSLDPMAEAAAFLNPDAGFADAFAVLDGVRDLLSERWAEDATLVGKLRE
WLWAEGLFQSKLAPGKDENHPDHSKFRDYFDYDEPIRTVPSHRALAVFRGRTLEILDAKL
VLDEEVVPGQPTLAEGRIAQHLGWRHAKRAGDELIRKTIAWTWKVKLSMSLERDLFGRLR
EEAEKVAIKVFAENLRDLLLAAPAGKRVVMGLDPGIRTGVKVAVVSDTGKVLATSTVYPH
EPKCDWEGSLHTLGRLVATHGVNLIAIGNGTASRETDKLAADLIKRIQGMAPDVKLEKVV
VSEAGASVYSASEFASKELPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV
NQSELARTLDAVVEDCVNSVGVDLNTASAPLLAQVSGLSTAVANSIVRWRDANGAFRNRQ
QLLDVAGLGAKTFEQAAGFLRIRDGDNPLDLSGVHPETYPVVEKIIAAAGRPVQELIGNA
DVIRKLRPEAFADEKFGAITVKDILAELEKPGRDPRPDFKVARFNDGVEDIKDLKEGMVL
EGTVSNVAQFGAFVDLGVHQDGLVHVSQLSNKFVNDAREVVKTGDIVKVKVLEVDLARKR
ISLTMKLDAAAPGPKSGSRGDNSYRPAARGERAQSGRGHPAEAPNAMAAAFAKLKR
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgttgcaaattgcggccgaactgaaggttcggccggcccaagtcaat
gccgccgtcaccctgctggacggcggcgccacggtgcccttcatcgcccgctaccgcaag
gaggccaccgacggcctggacgacatccagctgcgcgagctggaagcccggctgggctac
ctgcgcgagctggaagagcgccgcgacgcggtgctgaaaagcatcgacgagcagggcaag
ctcacgccggagctgcgcgccgccatcgaggccgcgcccaccaagcaggagctggaagac
ctctacctgccctacaagcccaagcgtcgcaccaagggcatgatcgcccgtgaggcgggg
ctggagccgctggccgacaagctgtttgccgaccccagcctggacccgatggccgaggcc
gccgccttcctgaacccggatgccggttttgccgacgccttcgcggtgctggacggcgtg
cgcgacctgctgtccgaacgctgggccgaggacgccaccctggtgggcaagctgcgcgaa
tggctgtgggccgagggcctgttccagtccaagctggccccgggcaaggacgagaaccac
cccgaccacagcaagttccgcgactacttcgactacgacgagccgatccgcaccgtgccc
agccaccgcgcgctggcggtgttccgcggccgcacgctggagatcctggacgccaaactg
gtgctcgacgaggaagtggtgccggggcaacccacgctggccgaaggccgcatcgcccag
cacctgggctggcgccacgccaagcgtgccggcgacgagctgatccgcaagaccatcgcc
tggacctggaaggtcaagctgtcgatgagcctggagcgcgacctgttcggccgcctgcgc
gaagaggccgagaaggtggccatcaaggtctttgccgagaacctgcgcgacctgctgctg
gccgcaccggccggcaagcgcgtggtgatgggcctggacccgggcatccgcaccggggtg
aaggtggcggtggtgagcgacaccggcaaggtgctggccacgtccaccgtctacccgcac
gagcccaagtgcgactgggaaggcagcctgcacaccctgggtcgcctggtggccacccat
ggcgtgaacctgatcgccatcggcaacggcaccgccagccgcgaaaccgacaagctggcg
gccgacttgatcaagcgcatccagggcatggccccggacgtgaagctggagaaggtggtg
gtcagcgaggccggcgcctccgtctactcggcctccgaattcgcctccaaggaactgccg
gacctggacgtgagcctgcgcggcgcggtgtccatcgcccgccgcctgcaggatccgctg
gccgagctggtgaagatcgagcccaagagcatcggcgtgggccagtaccagcacgacgtg
aaccagagcgagctggcccgcacgctggacgcggtggtggaagactgcgtgaactcggtg
ggcgtggacctgaacaccgcgtcggcgccgctgctggcccaggtctcgggcctgtccacc
gcggtggccaacagcatcgtgcgctggcgcgacgccaacggcgccttccgcaaccgccag
cagctgctggacgtggccggcctgggcgccaagaccttcgagcaggccgcgggcttcctg
cgcatccgcgatggcgacaacccgctggacctgtcgggtgtacacccggaaacctacccg
gtggtcgaaaagatcatcgccgccgccggccggccggtgcaggagctgatcggcaatgcc
gacgtgatccgtaagctgcggcccgaggcctttgccgacgagaagttcggcgccatcacg
gtcaaggacatcctggccgagctggaaaagcccggccgcgacccgcgcccggacttcaag
gtggcccgcttcaatgatggcgtcgaagacatcaaggacctgaaggaagggatggtgctg
gaaggcacggtgtccaacgtggcccagttcggcgccttcgtggacctgggcgtgcaccag
gacggcctggtgcatgtgagccagctctccaacaagttcgtcaacgacgcccgcgaggtg
gtcaagaccggcgacatcgtcaaggtcaaggtgctggaggtggacctggcccgcaagcgc
atcagcctgacgatgaagctcgacgccgccgcgcctggccccaagagcggcagccgtggc
gacaacagctaccgcccggccgcccgtggcgagcgcgcccagtccggtcgtggccacccg
gccgaggccccgaacgcgatggccgcggccttcgccaagctcaagcgctga
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