Ideonella dechloratans: LRM40_09240
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Entry
LRM40_09240 CDS
T07737
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
idc
Ideonella dechloratans
Pathway
idc00230
Purine metabolism
idc00270
Cysteine and methionine metabolism
idc01100
Metabolic pathways
idc01232
Nucleotide metabolism
Module
idc_M00958
Adenine ribonucleotide degradation, AMP => Urate
idc_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LRM40_09240 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LRM40_09240 (pgeF)
Enzymes [BR:
idc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
LRM40_09240 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
LRM40_09240 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
LRM40_09240 (pgeF)
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GFIT
Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
UFU08536
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All DBs
Position
1989257..1990042
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AA seq
261 aa
AA seq
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MPSERHPDWLVADGLPAQVRGLMATRAGGVSQGACQGLNLRPVGLPGGTADDAAHIRENQ
RRFAAALDGAVPVYLNQVHGADAVRLHRAELPAAGEHPVADASFTTDRGVACTVLVADCL
PVLLAAPDGRGVAAAHAGWRGLAGGVLERTVTALCEAAACEPSELSAWLGACIGPERFEV
GEEVRTAFLRQPSHTAERFRATGTAGKWWADLPGLARERLGHLGLHRVSGGQWCTVSEPS
RFFSFRRDRDTGRHAAAIWIV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgagcgccatcccgactggctggtggccgacgggctgccggcgcaggtgagg
gggctgatggccacccgggccgggggcgtcagccaaggtgcctgtcaggggctgaacctg
cggcccgtcgggctgccggggggcaccgcggacgacgccgcccacatccgcgagaaccag
cggcgcttcgccgccgccctggacggcgccgtgccggtctatctgaaccaggtgcacggg
gccgatgccgtgcgcctgcaccgggccgaactgcccgcagccggcgagcacccggtggcc
gatgccagcttcacgaccgaccgtggggtggcctgcacggtgctggtggcggactgcctg
ccggtgctgctggccgcccccgacgggcgcggggtggccgccgcccacgccggctggcgg
ggcttggcgggcggcgtgctggagcgcaccgtgaccgccttgtgcgaggctgcggcctgc
gagccgtcggagctgtcggcctggctgggcgcctgcatcggtccggagcgcttcgaggtg
ggtgaggaggtgcggacagccttcctccggcagccctcccacacggccgagcgctttcgc
gccaccggcaccgccggcaagtggtgggccgatctgcccggactggcgcgggagcgcctg
gggcatctcggcttgcatcgggtcagcggcggtcaatggtgcacggtcagcgaaccgtca
cggttcttctcgtttcggcgcgaccgggacaccggccgacacgcggctgccatctggatc
gtctga
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