Ideonella dechloratans: LRM40_09695
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Entry
LRM40_09695 CDS
T07737
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
idc03021
]
LRM40_09695 (nusA)
03009 Ribosome biogenesis [BR:
idc03009
]
LRM40_09695 (nusA)
Transcription machinery [BR:
idc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LRM40_09695 (nusA)
Ribosome biogenesis [BR:
idc03009
]
Prokaryotic type
rRNA transcription factors
LRM40_09695 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UFU08616
LinkDB
All DBs
Position
complement(2088190..2089668)
Genome browser
AA seq
492 aa
AA seq
DB search
MNREMLMLVDAISREKGVDREVVFGAVELALASATKKLHGGEVDIRVAIDRDTGEYETFR
RWHVVPDEAGLQIPDAEILLFEAKEQIGDIEVDDYIEEPIESVPIGRIGAQAAKQVILQK
IRDAEREQLLNDFLARGEKIFVGTVKRLDKGDIIVESGRVEGRLKRNEMIPKENLRTGDR
VRAFIAGVDPTARGPQIMLSRSAPGFMVELFAQEVPEIEQGLLEIKSCARDPGSRAKIAV
VSHDKRVDPIGTCVGVRGSRVTAVTNELAGERVDIVLWSEDPAQFVIGALAPANVQSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASELTGWRINIMTAEESAAKQAQESDVVRRL
FVDKLDVDEEVADILIAEGFTSLEEVAYVPLQEMLEIEGFDEDTVTELRNRAKDALLTME
IVREEGVGGVSQDLRDLEGLNPDLIAKLAAGGVNSRDDLADLAVDELVEMTGVDDVEAKA
LIMKAREHWFNA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaaatgctgatgttggtggatgcgatctcgcgcgagaagggcgtggaccgc
gaggtggtgttcggcgcggttgaactggcgctggcctctgccaccaagaagctgcacggc
ggcgaggtcgatatccgcgtggccatcgaccgcgataccggcgagtacgagaccttccgt
cgttggcatgtggtgcccgatgaggccggcctgcagattcccgatgcggagatcctgctg
ttcgaggccaaggagcagatcggcgacatcgaggtcgacgactacatcgaggagccgatc
gagtcggtgcccatcggccgcattggcgcgcaggccgccaagcaggtcatcctgcaaaag
atccgtgacgccgagcgcgagcaactgctcaacgatttcctggcccgtggcgagaagatc
ttcgtgggcacggtcaagcgtctggacaagggcgacatcatcgtcgagtccggccgtgtc
gaaggccgcctcaagcgcaacgagatgatcccgaaggagaacctgcgcaccggcgaccgc
gtgcgtgcgttcatcgccggcgtcgatcccaccgcccgcggcccgcagatcatgctctcg
cgctccgccccgggtttcatggtcgagctgttcgcccaggaggtgcccgagatcgagcag
ggtctgctggagatcaagagctgcgcccgcgacccgggcagccgcgccaagatcgccgtc
gtctcgcacgacaagcgggtcgatccgatcggcacctgtgtcggcgtgcgcggctcccgc
gtcacggccgtgaccaacgagctggccggcgaacgcgtggacatcgtgctgtggtcggag
gatccggcccagttcgtgatcggcgccctggccccggccaatgtgcaatccatcgtcgtg
gacgaagagaagcacgcgatggacgtggtggtcgacgaggagaacctggcgatcgccatc
ggccgtggcggccagaacgtgcgtctggcctccgagctgaccggctggcgcatcaacatc
atgacggccgaggaatcggcggccaagcaggcgcaggaatccgacgtcgtgcgccgcctg
ttcgtcgataagctggatgtggacgaggaagtcgccgacatcctgatcgccgaaggtttc
accagcctggaagaggtggcctacgtgccgctgcaggaaatgctggaaatcgaaggcttc
gacgaagacaccgtcaccgagctgcgcaaccgggccaaggatgcgctgctcaccatggaa
atcgtgcgcgaggagggcgtgggcggcgtgtcccaggacctgcgcgacctggaggggctg
aaccctgatctgatcgccaagctggccgccgggggagtgaattcccgtgacgacctggca
gacctggccgtcgacgaactggtcgagatgaccggcgtcgatgatgtcgaggccaaggcg
ctgatcatgaaggcccgtgagcactggttcaacgcctga
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