Ideonella dechloratans: LRM40_09990
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Entry
LRM40_09990 CDS
T07737
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
LRM40_09990
Enzymes [BR:
idc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LRM40_09990
Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LRM40_09990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
HTH_23
HTH_28
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UFU08669
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Position
2144749..2146473
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AA seq
574 aa
AA seq
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MRKALCFVAVLAALLSGCATPTSNPESNTPSAGPSGSAGMPPPLADLSPAPAPDRKGAPL
AALGPGQPASAPVPVDPLDADQPVDTQSAAAQEDLWLRIRSGFAMPDLDNDLVRKQEQFY
ASKPDYIQRMVDRGSRYLYHVVSEIQKRHMPTELALLPFVESAFNPHAVSTAQASGMWQF
VPATGKTFDLKQNVFRDDRRDVLASTRAALDYLQKLYGMFNDWQLALAAYNWGEGSVQKA
IKRNEAAGLPTDYESLRMPAETRNYVPKLQAIKNIVAHPEQFAINLPPLQNHPYFLSVPL
DRDIDVDLAAKLAGVSLEEFRQLNPQVNKPVMLAAGTDQVLLPYDAAAQFVSRIQQYPGQ
LASWTAWVAPRTLRPVDAAKMVGMDEDELRRVNRIPAKMLVKAGSTLLVPRSATRTADVS
AEVADSGMIALAPDVPPLRKVALKAGRKGDTVAAVARRYKVSASQVAQWNKTSSTGRFKP
GSSFVVYLPTKAAVAVARADDARDEPSRGKAATSSSRKSSSRTAARATKVADASPAKKEV
KSSHKASRSVNTRSTKTASAAKPTAKSNVRVAQR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagccctctgcttcgtggccgtgctggccgcccttctatccggatgcgcgaca
ccgacctcgaaccccgagagcaacaccccatcggctggccccagcggcagcgccggcatg
ccgccgccgctggccgacctgagcccggcgcccgcgccggatcgcaagggcgccccgctg
gccgctctgggccccggccagccggcgtccgcaccggtgccggtggacccgctggatgcc
gaccagccggtcgacacgcagtccgccgccgcccaggaggatctctggctgcgcatccgc
tcgggctttgccatgccggacctggacaacgacctggttcgcaagcaggagcagttctac
gccagcaagcccgactacatccagcgcatggtggaccgcggcagccgctacctgtaccac
gtggtctccgagatccagaagcgccacatgcccaccgagctggcgctgctgcccttcgtc
gaaagcgccttcaacccgcatgccgtgtcgacggcccaggcctccggcatgtggcagttc
gtcccggccaccggcaagaccttcgacctcaagcagaacgtgttccgcgatgaccggcgt
gacgtgctggcctccacccgtgccgcgctggactacctgcagaagctctacggcatgttc
aacgactggcaactggccctggccgcctacaactggggtgaaggcagcgtgcagaaggcc
atcaagcgcaacgaggcggccggcctgccgaccgactatgagagcctgcgcatgccggcg
gaaacccgcaattacgtgcccaagctccaggccatcaagaacatcgtggcccaccccgag
cagttcgcgatcaacctgccgccgctgcagaaccacccctacttcctgagcgttcccctg
gaccgcgacatcgacgtggacctggccgccaagctggccggcgtgtcgctggaggaattc
cgtcagctcaacccccaggtcaacaagccggtgatgctggccgcgggcaccgaccaggtg
ctgctgccctatgacgccgccgcccagttcgtctctcgcatccagcagtaccccggccag
ctggccagctggacggcctgggtggcaccgcgcaccctgcgcccggtcgatgccgccaag
atggtgggcatggacgaagacgagctgcgccgcgtgaaccgcattcccgccaagatgctg
gtcaaggccggctccaccctgctggtgccgcgctcggccacccgcacggccgatgtctcg
gccgaggtggccgacagcggcatgatcgcgctggccccggacgtgccgccgctgcgcaag
gtggcgctgaaggccggacgcaagggtgacaccgtggccgcagtggcccgccgctacaag
gtcagcgccagccaggtggcccagtggaacaagacctccagcacgggccgcttcaagccg
ggcagcagcttcgtggtgtacctgccgaccaaggccgccgtggccgtggcccgcgcggac
gatgcccgcgatgagcccagccgcggcaaggccgccaccagcagctcgcgcaagagttcg
tcgcgcaccgcggcccgtgccaccaaggtggcagacgccagcccggccaagaaggaggtc
aagtcctctcacaaggccagccgcagcgtgaacacccgcagcaccaagacggccagcgcc
gccaagccgaccgccaagtccaacgtgcgggtcgcgcagcgctga
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