Ideonella dechloratans: LRM40_10715
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Entry
LRM40_10715 CDS
T07737
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idc03009
]
LRM40_10715 (rimO)
Enzymes [BR:
idc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LRM40_10715 (rimO)
Ribosome biogenesis [BR:
idc03009
]
Prokaryotic type
ribosomal protein modification factors
LRM40_10715 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UFU08804
LinkDB
All DBs
Position
complement(2297181..2298584)
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AA seq
467 aa
AA seq
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MSSAPDTAAATPNTPGDAPTIGFVSLGCPKALTDSELILTQLSAEGYKTAKTYQGADLVI
VNTCGFIDDAVQESLDAIGEALAENGKVIVTGCLGAREGADGGNMVREVHPKVLAVTGPH
ATQEVMDAVHQHVPKPHDPFVDLVPAAGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGD
LVSRPVGDVLNEARALFEGGVKELLVVSQDTSAYGVDVKYRTGFWNGAPVKTRMLDLAAK
LGELAREHGAWARMHYVYPYPHVDEVIPLMAEGLVLPYLDVPFQHAHPDVLKRMKRPASG
EKNLERILRWRELCPEIVIRSTFIAGFPGETEEEFQYLLDFLREAQIDRAGCFAYSPVDG
ATANALPGALPDDVREERRARFMAVAEQVSIERLRRRVGATMQVLVDSAPALGRRGGVGR
TYADAPEIDGTVRILPPAKASVQLKVGEFAKVRIVGAEGHDLVGEPF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgcacccgacaccgccgccgccaccccgaacacccccggcgacgcccccacc
atcggcttcgtcagcctgggctgccccaaggcgctgaccgattccgagctgatcctcacc
cagctctcggccgaaggctacaagaccgccaagacctaccagggcgccgacctggtcatc
gtcaacacctgcggcttcattgatgacgccgtgcaggagagcctggacgccatcggcgag
gccctggccgagaacggcaaggtcatcgtcaccggctgcctgggcgcgcgagagggcgcg
gacggcggcaacatggtgcgcgaggtgcaccccaaggtgctggccgtgaccggcccgcat
gccacccaggaggtgatggacgcggtgcaccagcacgtgcccaagccgcacgaccccttc
gtggacctggtgccggccgccggcatcaagctcacccccaagcactacgcctacctgaag
atcagcgagggctgcaaccaccgctgcaccttctgcatcatccccagcatgcgcggcgac
ctggtctcccgcccggtgggcgatgtgctcaacgaggcccgggccctgttcgagggcggg
gtgaaggagctgctggtcgtcagccaggacacctcggcctacggcgtggacgtgaagtac
cgcaccggcttctggaacggcgcgccggtcaagacccgcatgctcgacctggcggccaag
ctgggcgagctggcccgcgaacacggcgcctgggcgcgcatgcactatgtctacccctac
ccgcatgtggacgaggtcatcccgctgatggccgagggcctggtgctgccctacctggat
gtccccttccagcatgcccacccggatgtgttgaagcgcatgaagcgcccggccagcggc
gagaagaacctcgagcgcatcctgcgctggcgcgagctgtgcccggagatcgtgatccgc
tcgaccttcatcgccggcttcccgggcgagaccgaagaagagttccagtacctgctggac
ttcctgcgcgaggcgcagatcgaccgggccggctgcttcgcctattcgccggtggacggc
gccaccgccaacgcgctgccgggcgcgctgcccgacgacgtgcgcgaggagcggcgtgcc
cgcttcatggccgtggccgagcaggtctccatcgagcgcctgcgccgccgcgtgggcgcc
accatgcaggtgctggtggacagcgcgccggccctgggccgccgcggcggggtggggcgc
acctacgccgacgcgccggagatcgacggcacggtgcgcatcctgccgccggccaaggcc
tcggtgcagctgaaggtgggcgagttcgccaaggtccgcatcgtcggggccgagggccac
gacctggtcggcgaacccttctga
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