KEGG   Ideonella dechloratans: LRM40_10790
Entry
LRM40_10790       CDS       T07737                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
idc  Ideonella dechloratans
Pathway
idc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:idc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LRM40_10790
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:idc02022]
    LRM40_10790
Two-component system [BR:idc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LRM40_10790
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 HTH_30 HTH_1 bpMoxR TIP49 AAA HTH_20 AAA_3
Other DBs
NCBI-ProteinID: UFU08816
LinkDB
Position
2315111..2316481
AA seq 456 aa
MSDPLRTVVLIEDDPGVQLAAAQALQIGGFQVLPCDSAEQAQALLKPDFPGVVVCDVRLP
GKDGLTLLRELHRTDPDLPVTLVTGHGDVAMAVEAMREGAWDFIEKPFASERLIDVTRRA
AIQRQLVLENRRLKAALSGTGRLIGASPAMERIRTLVANLGPTGVDVLIEGETGAGKEVV
AQALHEASGASGPFVAINCGALPEAVFESEIFGAEPGAYTGATKRRIGKLEHARDGTVFL
DEIESMPLALQVKLLRVLQERSFERLGGNTVLPLQARVIAATKVDLKALADRGGFRADLY
YRLNVATLALPPLRERREDIPLLLTHFAELAGLRFRRPVPRWGAAQMAAWQARDWSGNVR
ELRHLADRWVLGLEDTATEAADRDAPAGAPGDGTAAAPRAGLEAQLEAFERGLIEAALRE
SQGSVSAAAATLDLPRKTLSDRIRRLGLDAERFRLS
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgagtgatcccctgcgcaccgtcgtgctgatcgaggacgaccccggcgtccagctggcc
gccgcccaggccctgcagatcggcggcttccaggtgctgccctgcgacagcgccgaacag
gcccaggccctgctgaaacccgacttccccggcgtggtggtgtgcgacgtgcgactgccc
ggcaaggacggcctgaccctgctgcgcgagctgcaccgcaccgatcccgacctgccggtc
acgctggtgaccggccacggcgatgtggccatggcggtggaggccatgcgcgagggcgcc
tgggatttcatcgagaagccctttgcctccgagcgcctgatcgacgtgacccggcgcgcc
gccatccagcgccagctggtgctggagaaccggcgcctgaaggccgccttgtcgggcacc
ggccggctgatcggcgcctcgcccgccatggagcgcatccgcaccctggtggccaacctc
ggcccgaccggggtggacgtgctgatcgagggcgagaccggcgccggcaaggaggtggtg
gcccaggccctgcacgaggccagcggcgccagcgggcccttcgtcgcgatcaactgcggc
gctctgcccgaggcggtgttcgagtccgagatcttcggcgccgagcccggcgcctacacc
ggcgccaccaagcgccgcatcggcaagctcgaacatgcgcgcgacggcacggtcttcctc
gacgagatcgagtcgatgccgctggccctgcaggtcaagctgctgcgggtgctgcaggag
cgcagcttcgaacgcctgggcggcaacaccgtgctgccgctgcaggcccgggtcatcgcg
gccaccaaggtggacctcaaggccctggccgaccgcgggggcttccgggccgacctgtat
taccgcctgaacgtggccaccctggccctgccgccgctgcgcgagcggcgcgaggacatc
cccctgctgctgacccatttcgccgagctggccgggctgcgcttccgccgcccggtgccg
cgctggggcgcggcgcagatggccgcctggcaggcccgcgactggtcgggcaatgtgcgc
gagctgcgccacctggccgaccgctgggtgctggggctggaggacaccgcgacggaggcc
gcggaccgtgacgcccccgcgggcgcgcctggcgatggcacggccgcggcgccgcgggcc
ggcctggaggcccagctggaggccttcgagcgcgggctgatcgaggccgcgctgcgcgaa
tcgcagggcagcgtcagcgcggcggcggcgacactggacctgccgcgcaagaccctgtcc
gaccgcatccgccggctgggcctggacgccgagcgcttccgcctcagctga

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