KEGG   Ideonella dechloratans: LRM40_11175
Entry
LRM40_11175       CDS       T07737                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
idc  Ideonella dechloratans
Pathway
idc00010  Glycolysis / Gluconeogenesis
idc00020  Citrate cycle (TCA cycle)
idc00260  Glycine, serine and threonine metabolism
idc00280  Valine, leucine and isoleucine degradation
idc00310  Lysine degradation
idc00380  Tryptophan metabolism
idc00620  Pyruvate metabolism
idc00630  Glyoxylate and dicarboxylate metabolism
idc00640  Propanoate metabolism
idc00670  One carbon pool by folate
idc00785  Lipoic acid metabolism
idc01100  Metabolic pathways
idc01110  Biosynthesis of secondary metabolites
idc01120  Microbial metabolism in diverse environments
idc01200  Carbon metabolism
idc01210  2-Oxocarboxylic acid metabolism
idc01240  Biosynthesis of cofactors
Module
idc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
idc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
idc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
idc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:idc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LRM40_11175 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LRM40_11175 (lpdA)
   00620 Pyruvate metabolism
    LRM40_11175 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LRM40_11175 (lpdA)
   00640 Propanoate metabolism
    LRM40_11175 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LRM40_11175 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LRM40_11175 (lpdA)
   00310 Lysine degradation
    LRM40_11175 (lpdA)
   00380 Tryptophan metabolism
    LRM40_11175 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LRM40_11175 (lpdA)
   00670 One carbon pool by folate
    LRM40_11175 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:idc04147]
    LRM40_11175 (lpdA)
Enzymes [BR:idc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LRM40_11175 (lpdA)
Exosome [BR:idc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LRM40_11175 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_2 Pyr_redox_3 GIDA FAD_binding_3 DAO 3HCDH_N 2-Hacid_dh_C Thi4 Lycopene_cycl
Other DBs
NCBI-ProteinID: UFU08888
LinkDB
Position
complement(2401111..2402538)
AA seq 475 aa
MSKQFDVVVIGGGPGGYIAAIRAAQLGFNVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFEHATHHFAEHGISTGTVKMDVAKMVARKDTVVKQNNDGILYLFKKNKVSFFHG
RGSFAGAKDGAYEVKVAGAAEEVLVAKQVIIATGSNARQLPGAEFDEDLILSNDGALRVG
AVPKKLGVIGSGVIGLEMGSVWRRLGAEVTILEAMPTFMGAADEAVAKEALKVFTKQGLK
IELGVKIGEVKKGKKSVTLSYANAKGEAQTLEVDKLIVSIGRVPNTVGLNPEAVGLQLDE
RGAIVVDAECKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFGTIPWVI
YTSPEIAWVGKTEQQLKAEGVAYKAGQFPFLANGRARALGDTTGFVKFLADAKTDEILGV
HIIGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtccaagcaatttgacgtcgtcgtcatcggcggcggccccggtggctacatcgccgcc
atccgtgcggcccagctgggcttcaatgtggcctgcatcgacgagtggaagaatgccgcc
ggcggtccggccccgggtggcacctgcaccaacgtcggctgcatcccgtccaaggccctg
ctgcagtcgtccgagcatttcgagcacgccacccaccacttcgccgagcacggcatcagc
accggcacggtgaagatggacgtggccaagatggtggcccgcaaggacaccgtcgtgaag
cagaacaacgacggcatcctttacctgttcaagaagaacaaggtcagcttcttccacggt
cgcggctccttcgccggtgccaaggacggtgcctacgaagtcaaggtggccggcgccgcc
gaagaggtgttggtggccaagcaggtcatcatcgccaccggctccaatgcccgccaactg
ccgggggccgagttcgacgaggacctgatcctgtccaacgatggcgcactgcgcgtcggc
gccgtgccgaagaagctgggcgtgatcggctccggcgtcatcggcctggaaatgggctcg
gtctggcgtcgtctgggcgccgaggtgaccatcctcgaagccatgccgaccttcatgggc
gcggcggacgaagcggtggccaaggaggccctgaaggtcttcaccaagcaaggtctgaag
atcgagctgggcgtgaagatcggcgaggtcaagaagggcaagaagagcgtcaccctcagc
tatgccaacgccaagggcgaggcccagacgctggaagtggacaagctgatcgtctcgatc
ggccgcgtgcccaacaccgtcggtctgaaccccgaggccgtgggcctgcagctcgacgag
cgcggcgccatcgtcgtcgatgccgagtgcaagaccaacctgccgggcgtctgggcggtg
ggcgacgtggtgcgtggcccgatgctggcgcacaaggccgaggaagagggcgtggcggtg
gccgagcgcatcgcgggccagcatggtcacgtcaacttcggcaccatcccctgggtcatc
tacaccagcccggagatcgcctgggtcggcaagaccgagcagcagctcaaggccgagggt
gtggcctacaaggcgggccagttccccttcctggccaacggccgggcccgtgcgctgggc
gacaccaccggcttcgtcaagttcctggccgatgccaagaccgacgagatcctgggcgtg
cacatcatcggcccgatggcctcggagctgatctccgaagccgtggtggcgatggagttc
aaggcctcggccgaggacatcgcgcgcatctgccacgcccaccccagcctgagcgaggcg
accaaggaagccgctctggcggtggacaagcgcacgctgaacttctga

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