Ideonella dechloratans: LRM40_11175
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Entry
LRM40_11175 CDS
T07737
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
idc
Ideonella dechloratans
Pathway
idc00010
Glycolysis / Gluconeogenesis
idc00020
Citrate cycle (TCA cycle)
idc00260
Glycine, serine and threonine metabolism
idc00280
Valine, leucine and isoleucine degradation
idc00310
Lysine degradation
idc00380
Tryptophan metabolism
idc00620
Pyruvate metabolism
idc00630
Glyoxylate and dicarboxylate metabolism
idc00640
Propanoate metabolism
idc00670
One carbon pool by folate
idc00785
Lipoic acid metabolism
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
idc01210
2-Oxocarboxylic acid metabolism
idc01240
Biosynthesis of cofactors
Module
idc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
idc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
idc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
idc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LRM40_11175 (lpdA)
00020 Citrate cycle (TCA cycle)
LRM40_11175 (lpdA)
00620 Pyruvate metabolism
LRM40_11175 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LRM40_11175 (lpdA)
00640 Propanoate metabolism
LRM40_11175 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRM40_11175 (lpdA)
00280 Valine, leucine and isoleucine degradation
LRM40_11175 (lpdA)
00310 Lysine degradation
LRM40_11175 (lpdA)
00380 Tryptophan metabolism
LRM40_11175 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LRM40_11175 (lpdA)
00670 One carbon pool by folate
LRM40_11175 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
idc04147
]
LRM40_11175 (lpdA)
Enzymes [BR:
idc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LRM40_11175 (lpdA)
Exosome [BR:
idc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LRM40_11175 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
Pyr_redox_3
GIDA
FAD_binding_3
DAO
3HCDH_N
2-Hacid_dh_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UFU08888
LinkDB
All DBs
Position
complement(2401111..2402538)
Genome browser
AA seq
475 aa
AA seq
DB search
MSKQFDVVVIGGGPGGYIAAIRAAQLGFNVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFEHATHHFAEHGISTGTVKMDVAKMVARKDTVVKQNNDGILYLFKKNKVSFFHG
RGSFAGAKDGAYEVKVAGAAEEVLVAKQVIIATGSNARQLPGAEFDEDLILSNDGALRVG
AVPKKLGVIGSGVIGLEMGSVWRRLGAEVTILEAMPTFMGAADEAVAKEALKVFTKQGLK
IELGVKIGEVKKGKKSVTLSYANAKGEAQTLEVDKLIVSIGRVPNTVGLNPEAVGLQLDE
RGAIVVDAECKTNLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFGTIPWVI
YTSPEIAWVGKTEQQLKAEGVAYKAGQFPFLANGRARALGDTTGFVKFLADAKTDEILGV
HIIGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaatttgacgtcgtcgtcatcggcggcggccccggtggctacatcgccgcc
atccgtgcggcccagctgggcttcaatgtggcctgcatcgacgagtggaagaatgccgcc
ggcggtccggccccgggtggcacctgcaccaacgtcggctgcatcccgtccaaggccctg
ctgcagtcgtccgagcatttcgagcacgccacccaccacttcgccgagcacggcatcagc
accggcacggtgaagatggacgtggccaagatggtggcccgcaaggacaccgtcgtgaag
cagaacaacgacggcatcctttacctgttcaagaagaacaaggtcagcttcttccacggt
cgcggctccttcgccggtgccaaggacggtgcctacgaagtcaaggtggccggcgccgcc
gaagaggtgttggtggccaagcaggtcatcatcgccaccggctccaatgcccgccaactg
ccgggggccgagttcgacgaggacctgatcctgtccaacgatggcgcactgcgcgtcggc
gccgtgccgaagaagctgggcgtgatcggctccggcgtcatcggcctggaaatgggctcg
gtctggcgtcgtctgggcgccgaggtgaccatcctcgaagccatgccgaccttcatgggc
gcggcggacgaagcggtggccaaggaggccctgaaggtcttcaccaagcaaggtctgaag
atcgagctgggcgtgaagatcggcgaggtcaagaagggcaagaagagcgtcaccctcagc
tatgccaacgccaagggcgaggcccagacgctggaagtggacaagctgatcgtctcgatc
ggccgcgtgcccaacaccgtcggtctgaaccccgaggccgtgggcctgcagctcgacgag
cgcggcgccatcgtcgtcgatgccgagtgcaagaccaacctgccgggcgtctgggcggtg
ggcgacgtggtgcgtggcccgatgctggcgcacaaggccgaggaagagggcgtggcggtg
gccgagcgcatcgcgggccagcatggtcacgtcaacttcggcaccatcccctgggtcatc
tacaccagcccggagatcgcctgggtcggcaagaccgagcagcagctcaaggccgagggt
gtggcctacaaggcgggccagttccccttcctggccaacggccgggcccgtgcgctgggc
gacaccaccggcttcgtcaagttcctggccgatgccaagaccgacgagatcctgggcgtg
cacatcatcggcccgatggcctcggagctgatctccgaagccgtggtggcgatggagttc
aaggcctcggccgaggacatcgcgcgcatctgccacgcccaccccagcctgagcgaggcg
accaaggaagccgctctggcggtggacaagcgcacgctgaacttctga
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