Ideonella dechloratans: LRM40_12080
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Entry
LRM40_12080 CDS
T07737
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idc03032
]
LRM40_12080 (gyrA)
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_12080 (gyrA)
Enzymes [BR:
idc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LRM40_12080 (gyrA)
DNA replication proteins [BR:
idc03032
]
Prokaryotic type
DNA Topoisomerases
LRM40_12080 (gyrA)
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRM40_12080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UFU09047
LinkDB
All DBs
Position
2582458..2585088
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AA seq
876 aa
AA seq
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MTSFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPTRLPNLLVNGSAGIAVGMAT
NIPPHNLNEVVDACLHLLKAPDATLEQLMEIIPAPDFPTAGIIYGVNGVREGYRTGRGKV
VMRAKVHFEDIDRGQRQAIIVDEIPYQVNKKTLLERIAELVHEKKLEGISHIQDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKQLLEIFLEHRRE
VVTRRTVYELRKARERGHVLEGLAVALANIDEFIRIIKESPTPPVAKMALMQQSWDSSLV
REMLSRAEGENPGGAAAYRPEGLPMHFGMQADGLYRLSEDQAGEILQMRLQRLTGLEQDK
IIGEYREVMAQIADLLDILAKPARVTTIISEELIALRQEFGQTKIGARRSVVEHNVQELG
TEDLITPTDMVVTLSHTGYIKSQPLAEYRAQRRGGRGKQATATKEDDWIDQLFIANTHDW
ILCFSDLGRVYWLKVWEVPQGGRASRGKPIVNMFPLQPGEKVTVVLPLTGEFRSFPEDHY
VFMATKMGTVKKTPLNDFSNPRKAGIIAVGLDEGDFLIGAALTDGKHDVMLFSDSGKAVR
FDEDDVRPMGRSARGVRGMMLEDGQSLIAMLVAEDETQSVLTATENGFGKRTSIVEYTRH
GRGTKGMIAIQQSERNGKVVAATLVRPEDEIMLITDKGVLVRTRVAEIRELGRATQGVTL
IALDDGAKLSGLQRIVENDAGAAEGDANGTTEDTAE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgacttcattcgccaaggaaaccctgcccatcagtctcgaagaggagatgcggcgttcg
tatctggactacgcgatgagcgtcatcgtcggacgcgccctgcccgacgcccgcgatggc
ctgaagccggtgcaccggcgcgtgctcttcgcgatgcacgagctcaacaacgactggaac
cggccttacaagaagtcggcccgtatcgtcggtgacgtgatcggtaagtaccacccgcac
ggcgacaccgcggtctacgacaccatcgtccggatggcgcaggacttctcgctgcgccac
atgctggtggacggccagggcaacttcggctcggtggacggcgacaacgccgcggccatg
cggtacaccgaaatccgcctggccaaaatcgcccatgaaatgctggcggacatcgacaag
gaaactgtcgatttcggtccgaactatgacggttccgagaaagaacccctggttctgccc
acccgtctgcccaatttgctggtgaatggctcggccggtatcgcggtgggcatggccacc
aacattccgccgcacaacctcaacgaggtggtggatgcctgcctgcacctgctgaaggcg
ccggacgcgacgctggaacagttgatggaaatcatcccggcgccggacttcccgaccgcc
ggcatcatctacggcgtcaacggcgtgcgcgagggttaccgcaccggccgcggcaaggtg
gtgatgcgcgccaaggtccacttcgaggacatcgaccgtggccagcggcaggcgatcatc
gttgacgagatcccctaccaggtcaacaagaagacgctgctggaacgcatcgctgagttg
gtgcacgagaagaagctcgagggcatcagccacatccaggacgagtccgacaagtccggc
atgcgggtggtgatcgagctcaagcgcggcgaagtgcccgaggtggtgctcaacaacctg
tacaagcagacccagctgcaggacaccttcggcatcaacatggtggcgctggtggatggc
cagcccaagctgtgcaacctcaagcagctgctggagatcttcctggagcaccgccgcgag
gtggtgacccgccgcaccgtctatgaactgcgcaaggcccgcgagcgcggccatgtgctg
gaaggtctggctgttgcgctggccaacatcgacgagttcatccgcatcatcaaggaatcg
cccaccccgccggtggccaagatggccctgatgcagcagagctgggactcctcgctggtg
cgcgaaatgctctcgcgcgccgaaggcgagaaccccggcggtgcggccgcctaccggccg
gaaggcctgccgatgcacttcggcatgcaggccgatggcctgtaccgcctgtcggaagac
caagccggcgagatcctgcagatgcgcctgcagcgcctgaccggcctggagcaggacaag
atcattggcgagtaccgcgaggtgatggcccagatcgccgacctgctggacatcctggcc
aagccggcccgggtgacgacgatcatcagcgaggaactcatcgccctgcgccaggagttc
ggccagaccaagatcggcgcgcgccgctcggtggtcgagcacaacgtgcaggagctgggc
accgaggatctgatcacccccaccgacatggtggtgacgctcagccacaccggctacatc
aagagccagccgctggccgagtaccgcgcccagcgccgtggtggccgcggcaagcaggcc
accgccaccaaggaagacgactggatcgaccagctcttcatcgccaacacccacgactgg
atcctgtgcttcagcgacctgggccgggtgtactggctcaaggtctgggaagtgccgcag
ggcggccgcgccagccgtggcaagcccatcgtcaacatgttcccgctgcagccgggcgag
aaggtcaccgtggtgctgccgctgaccggcgagttccgcagcttccctgaagatcactac
gtcttcatggccaccaagatgggcacggtcaagaagacgccgctgaacgacttcagcaac
ccgcgcaaggccggcatcatcgcggtgggcctggacgagggcgatttcctgatcggcgcg
gcgctgaccgacggcaagcacgacgtcatgctcttcagcgacagcggcaaggccgtgcgt
ttcgacgaggacgatgtgcgtccgatgggccgcagcgcccgcggcgtgcgcggcatgatg
ctggaggacggccagtcgctgatcgcgatgctggtggccgaggacgagacccagtccgtg
ctgaccgccaccgagaacggcttcggcaagcgcacctccatcgtcgagtacacccgccac
ggccgtggcaccaagggcatgatcgccatccagcagagcgagcgcaacggcaaggtcgtg
gccgccacgctggtgcgcccggaggacgagatcatgctgatcaccgacaagggcgtgctg
gtgcgcacccgtgtcgccgaaatccgcgaactgggccgtgccacgcagggggtcacgctg
atcgccctggacgacggcgccaagctgagcggcctgcaacgcatcgtcgaaaacgatgca
ggcgccgccgaaggcgacgcgaacggtacgaccgaggacactgccgaatga
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