Ideonella dechloratans: LRM40_12115
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Entry
LRM40_12115 CDS
T07737
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idc03032
]
LRM40_12115
03036 Chromosome and associated proteins [BR:
idc03036
]
LRM40_12115
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_12115
DNA replication proteins [BR:
idc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LRM40_12115
Chromosome and associated proteins [BR:
idc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LRM40_12115
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LRM40_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
UFU09054
LinkDB
All DBs
Position
2592786..2593094
Genome browser
AA seq
102 aa
AA seq
DB search
MTRSDLVAKLAERFAQLTQRDTEFAVKTTLDAMSDALARGHRIEIRGFGSFSISRRPPRM
GRNPRSGEKVTIPEKLVPHFKPGKALREGVDASLPVDNTDGR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttctgatctcgttgccaagctggctgagcgatttgcccaactgacgcagcgc
gacaccgagttcgcggtcaagaccacgctcgatgcgatgtccgacgccctggcgcgcggg
caccgcatcgagatccggggcttcgggagcttctcgatcagccgccgaccgccgcgcatg
ggccgcaacccgcgctccggcgagaaggtgacgatccccgagaagctggtgccacacttc
aagccgggcaaagccctgcgcgagggtgtggatgccagcctgccggtggacaatacggac
ggtcggtaa
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