Ideonella dechloratans: LRM40_13655
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Entry
LRM40_13655 CDS
T07737
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
idc03021
]
LRM40_13655 (rpoH)
Transcription machinery [BR:
idc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRM40_13655 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
UFU09343
LinkDB
All DBs
Position
2944969..2945895
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AA seq
308 aa
AA seq
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MNMTNTTTNALALRDPWALVPPIGNLDAYITAVNQIPMLTAEEESRLARELQQDGDVQAA
GRLVLSHLRLVVSVSRQYLGYGLPQGDLIQEGNVGLMKAVKRFDPDQGVRLVSYALHWIK
AEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGLKDHAGDHETFRNTLTPDEVDVVAR
ELNVKPEEVVEMETRLSGGDVALEPQTDDGEESYAPIAYLADDSQEPTRVLEGRSRDLMS
SHGIQHALDKLDDRSRRIVEERWLKVNDDASGGMTLHELAAEYGVSAERIRQIEVAALKK
MRKALETA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgacgaacaccaccaccaacgctctcgctctgcgcgacccgtgggccctggtg
ccgcccatcgggaatctggacgcctacatcacggcggtcaaccagatccccatgctcacg
gccgaggaggaatcccgcctggcccgcgaactgcagcaggatggcgatgtccaggccgcc
ggccggctggtgctgtcgcacctgcggttggtcgtgtccgtctcccgccagtacctgggt
tacggcctgccgcaaggcgacctgatccaggaaggcaatgtcggcctgatgaaggcggtc
aagcgcttcgacccggaccagggcgtgcgcctggtgtcctacgccctgcactggatcaag
gccgagatccacgagtacatcctgaagaactggcgcatggtcaaggtggccaccaccaag
gcccagcgcaagcttttcttcaacctgcgctcgatgaagcagggcctgaaggaccatgcc
ggtgaccatgaaaccttccgcaacacgctgacgccggatgaggtggatgtggtggcgcgg
gagctgaatgtcaagccggaggaagtggtcgagatggaaacccggctgtccggcggcgac
gtggccctggagccgcagaccgacgacggcgaggagagctacgccccgatcgcctacctg
gccgatgacagccaggagccgacccgggtgctggaaggccgcagccgcgatctgatgagc
tcccacggcatccagcacgcgctggacaagctggacgaccgcagccgccgcatcgtcgag
gagcgctggctgaaggtgaacgacgacgccagcggcggcatgacgctgcacgagctggct
gccgagtacggcgtcagcgccgagcgcatccgccagatcgaggtggcggcgctcaagaag
atgcgcaaggcgctggaaacggcctga
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