Ideonella dechloratans: LRM40_13790
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Entry
LRM40_13790 CDS
T07737
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_13790
Enzymes [BR:
idc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LRM40_13790
DNA repair and recombination proteins [BR:
idc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LRM40_13790
Prokaryotic type
LRM40_13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UFU09369
LinkDB
All DBs
Position
2965577..2967076
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AA seq
499 aa
AA seq
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MTTRFDRALVWFRRDLRAEDHAALYAACRAARQVFCLFVFDTDILTPLPRQDRRVEFIRD
SLVDLDHQLQALGLSHGVDGVRLLVRHGRARQVVAELARTLGVQVVYANHDDEPDALARD
GAVRGELANEDVSFYTGKDHVIFERDEVMTAGGTPFSVFTPYKNAWLKKLTPFYLKAYPV
ARHAGALAPWPEAALGPATGVPELQDIDFQRTDLHRLRLPSGSAGAQELLADFLERIDDY
DRARDFPAVKGPSYLSTHLRFGTVSIRRLAREAWQRMEAGSRGAEVWLSELVWRDFYHQI
LHHHPHVVGHAFRPEYEAIHWAHGKTADAHFEAWCQGRTGYPLVDAAMRQLAQTGYMHNR
LRMVTASFLVKDLGIDWRRGEAWFALHLNDFDLAANNGGWQWAASTGCDAQPWFRIFNPV
TQSEKFDPEGKFIRRYVPELAKLPASAIHAPWQARPLELAEAGLRLEADYPLPIVDHAVA
RQHTLARYAVVKDRSKSAP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgattcgaccgtgccctggtctggttccggcgcgatctgcgcgccgaggac
cacgccgccctgtacgcggcctgccgagccgcccgccaggtgttctgcctcttcgtcttc
gacaccgacatcctcacccccctgccccgccaggaccggcgggtggagttcatccgtgac
agcctggtggacctggaccaccagctgcaggccctgggcctgtcccatggcgtcgacggg
gtgaggctgctggtgcgccatggccgtgcccgtcaggtggtggccgagctggcccgcacg
ctgggtgtgcaggtcgtctatgccaatcacgacgacgaacccgacgccctggcccgggac
ggcgcagtgcggggggagctggcgaacgaggatgtgtccttctacaccggcaaggaccat
gtgatcttcgagcgcgacgaggtgatgaccgccggcggcacgccgttctcggtcttcacc
ccctacaagaacgcctggctgaagaagctgacgcccttctacctgaaggcctatccggtg
gcccgccatgccggcgcgctggcgccctggcccgaagcggcgctggggccggccacgggg
gtgccggaactgcaggacatcgacttccagcgcaccgatctgcaccgcctgcgactgccc
tccggctctgcgggcgcccaggaactgctggccgatttcctggaacgcatcgacgactac
gaccgcgcgcgggacttcccggccgtcaagggccccagctacctgagcacccacctgcgc
ttcggcacggtgtccatccggcgtctggcccgcgaggcctggcagcgcatggaagccggc
tcgcgaggtgccgaggtctggctgtccgagctggtctggcgcgatttctaccatcagatc
ctgcaccaccacccgcatgtggtgggccatgccttccgacccgagtacgaagccatccac
tgggcccatggcaagacggccgatgcgcatttcgaggcctggtgccagggtcgcaccggc
tacccgctggtggacgccgcgatgcgccagctggcgcagacgggctacatgcacaaccgg
ctgcgcatggtgaccgccagcttcctcgtcaaggacctgggcatcgactggcggcgtggc
gaggcctggttcgccctgcacctcaacgacttcgacctggccgccaacaacggcggctgg
cagtgggcggcctccacgggctgcgacgcccagccctggttccgcatcttcaacccggtg
acccagagcgagaagttcgaccccgagggcaagttcatccggcgctatgtgcccgagctg
gccaagctgccagccagcgccatccacgccccctggcaggcccgcccgctggagctggcc
gaagccggactgcggttggaagcggactacccgctgccgatcgtggaccatgccgtggcc
cggcaacacaccctggcacgctacgccgtggtgaaggaccgcagcaagtccgccccctga
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