Ideonella dechloratans: LRM40_14680
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Entry
LRM40_14680 CDS
T07737
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_14680
Enzymes [BR:
idc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LRM40_14680
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LRM40_14680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UFU09534
LinkDB
All DBs
Position
complement(3173632..3175215)
Genome browser
AA seq
527 aa
AA seq
DB search
MAELRHLVLVLGDQLDLRSSAFDGFDPARDAVWMAEVMEESTHVWSSQPRTALFLAAMRH
FAQALRERGWTVHYRPLDAPEDPAHPGAGASLGAALAATLARQRPAALVLTAPGDWRVLQ
ALRAVARDQGLPLDLREDRHFYTTVREFAAFARGRKGLRLEHWYRHLRRRFGVLMRPDGE
PEGERWNFDADNRAAFGPEGPGPLPAPPRFAPDAITQQVLALVRTRLAGHPGALDDFAWP
VTRAQALQALDAFVRERLPLFGRYQDALWVGEPWLYHSQLSAALNLKLLDPREVVAAAEA
AWRAGQVPLAGAEGFIRQILGWREYVRGIYWTRMPGYAELNGLDATLPLPAWFWTGQTPM
ACLRDALHQTLRWGYAHHIQRLMVIGLYAQLLGVRPQEVHRWFLAVYVDAVEWVELPNTL
GMSQHADGGVMASKPYIASGQYLQRQGAPCAGCAFDPRQRSGPRACPYTTLYWDFLLRHQ
DWLAGHPRLGMQVRHLARLDETERTALQAQARALRAQGEQEAQEVPA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactgcgccacctggtgctggtgctgggcgaccagctcgacctgcggtcctcg
gccttcgacggcttcgacccggcccgtgacgcggtgtggatggccgaggtgatggaggaa
agcacccatgtctggtcgtcccagccgcgcaccgcgctgttcctggccgccatgcgccac
ttcgcccaggccctgcgggagcgtggctggacggtgcactaccggcccttggatgcaccc
gaggacccggcccaccccggcgcgggcgccagcctgggcgcggccctggccgccacgctg
gcccgccagcgcccggccgccctggtgctgaccgcgccgggcgactggcgcgtgctgcag
gccttgcgggccgtggcccgggaccagggcctgccgctggacctgcgcgaggaccgccac
ttctacaccacggtgcgcgaattcgccgccttcgcccgcggtcgcaagggcctgcggctg
gagcactggtaccgccatctgcgccgccgctttggcgtgctgatgcggcccgatggcgag
cccgagggcgagcgctggaacttcgacgccgacaaccgcgccgccttcggtcccgaggga
ccgggcccgctgccggccccgccgcgcttcgcgcccgatgcgatcacgcagcaggtgctg
gccctggtgcgcacccgcctggccgggcatcccggcgcgctggacgacttcgcctggccg
gtcacgcgcgcgcaggccctgcaggcgctggacgccttcgtgcgtgagcggctgccgctg
ttcggccgctaccaggatgcgctgtgggtcggcgagccctggctctaccactcgcagctg
tccgcggccctcaacctcaagctgctggacccgcgcgaggtggtggccgcggccgaggcc
gcctggcgcgccggccaggtgccgctggccggcgccgaaggcttcatccgccagatcctg
ggctggcgcgagtacgtgcgcggcatttactggacgcgcatgccgggctacgccgagctc
aacggcctggacgccacgctgccgctgcccgcctggttctggaccggccagacgccgatg
gcctgcctgcgcgatgcgctgcaccagaccctgcgctggggttatgcccaccacatccag
cgcctgatggtgatcggcctctatgcccagctgctgggcgtgcggcctcaggaagtccac
cgttggttcctggccgtctatgtcgatgcggtggagtgggtggagctgcccaacaccctg
ggcatgtcccagcacgccgatggcggcgtgatggccagcaagccctacatcgccagcggc
cagtacctgcagcgccagggcgcgccctgcgcgggctgcgccttcgacccgcgccagcgc
agcggcccgcgggcctgcccctacaccacgctgtactgggacttcctgctgcgccaccag
gactggctggccggccacccccgcctgggcatgcaggtgcgccacctggcccgcctggac
gagaccgagcgcaccgcgctgcaggcccaggcccgggcgctgcgcgcgcagggggaacag
gaggcgcaggaggtgccggcatga
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