Ideonella dechloratans: LRM40_14885
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Entry
LRM40_14885 CDS
T07737
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
idc
Ideonella dechloratans
Pathway
idc00300
Lysine biosynthesis
idc00470
D-Amino acid metabolism
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01230
Biosynthesis of amino acids
Module
idc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRM40_14885 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRM40_14885 (dapF)
Enzymes [BR:
idc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LRM40_14885 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UFU09574
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Position
complement(3212091..3212948)
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AA seq
285 aa
AA seq
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MRLHFTKMHGAGNDFVVLDATRAPLALSREQLQLLGDRRFGVGADQILVVEAAQTPGVDF
RYRIFNGATGDEVEQCGNGSRCFVRYVHDHGLSDQTTIRVETVNNRLTLTLQPDGRVTVD
MNQPRFAPADLPFDASGLVPREVNGMPLWPLDLGEGAQAEVALVSMGNPHAVLRVDDVAT
APVADWGPKIEAHPRFPRKVNAGFLQVRSRSEVALRVFERDAGETLACGTGACAAVVAGI
RLGWLDATVDVHTRGGVLTISWAGEGHSVMMTGPAVTVFEGEIEL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgcacttcaccaagatgcacggcgccggcaacgacttcgtcgtgctggacgcc
acccgcgcgccgctggcgctcagccgggaacagctgcagctcctgggcgaccgccgattc
ggcgtgggcgccgaccagatcctggtcgtcgaggccgcgcagacgcctggcgtggacttc
cgctaccgcatcttcaacggcgccaccggcgacgaggtggagcagtgcggcaacggttcg
cgctgcttcgtgcgctatgtgcacgaccacgggctgagcgaccagaccaccatccgcgtg
gagacggtcaacaaccgactgacgctgaccctgcagcccgacggccgggtgacggtggac
atgaaccagccccgcttcgcgccggccgatctaccgttcgacgccagcgggctggtgccg
cgcgaggtgaacggcatgccgctgtggccgctggacctgggcgagggggcgcaggccgag
gtggccctggtgtccatgggcaacccgcacgccgtgctgcgggtggatgacgtggccacc
gccccggtggccgactggggcccgaagatcgaggcccacccgcgtttcccgcgcaaggtc
aacgccggcttcctgcaggtgcgctcgcgcagcgaggtggccttgcgtgtgttcgagcgc
gacgcgggcgagaccctggcctgcggcaccggtgcctgcgcggcggtggtggccggcatc
cgcctgggctggctggatgccacggtggatgtgcacacccgcggcggcgtgctgaccatc
agctgggccggcgagggccattcggtgatgatgaccggtcccgcggtgaccgtctttgaa
ggagagatcgagctgtga
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