KEGG   Ideonella dechloratans: LRM40_14885
Entry
LRM40_14885       CDS       T07737                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
idc  Ideonella dechloratans
Pathway
idc00300  Lysine biosynthesis
idc00470  D-Amino acid metabolism
idc01100  Metabolic pathways
idc01110  Biosynthesis of secondary metabolites
idc01120  Microbial metabolism in diverse environments
idc01230  Biosynthesis of amino acids
Module
idc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:idc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LRM40_14885 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LRM40_14885 (dapF)
Enzymes [BR:idc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LRM40_14885 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UFU09574
LinkDB
Position
complement(3212091..3212948)
AA seq 285 aa
MRLHFTKMHGAGNDFVVLDATRAPLALSREQLQLLGDRRFGVGADQILVVEAAQTPGVDF
RYRIFNGATGDEVEQCGNGSRCFVRYVHDHGLSDQTTIRVETVNNRLTLTLQPDGRVTVD
MNQPRFAPADLPFDASGLVPREVNGMPLWPLDLGEGAQAEVALVSMGNPHAVLRVDDVAT
APVADWGPKIEAHPRFPRKVNAGFLQVRSRSEVALRVFERDAGETLACGTGACAAVVAGI
RLGWLDATVDVHTRGGVLTISWAGEGHSVMMTGPAVTVFEGEIEL
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgtttgcacttcaccaagatgcacggcgccggcaacgacttcgtcgtgctggacgcc
acccgcgcgccgctggcgctcagccgggaacagctgcagctcctgggcgaccgccgattc
ggcgtgggcgccgaccagatcctggtcgtcgaggccgcgcagacgcctggcgtggacttc
cgctaccgcatcttcaacggcgccaccggcgacgaggtggagcagtgcggcaacggttcg
cgctgcttcgtgcgctatgtgcacgaccacgggctgagcgaccagaccaccatccgcgtg
gagacggtcaacaaccgactgacgctgaccctgcagcccgacggccgggtgacggtggac
atgaaccagccccgcttcgcgccggccgatctaccgttcgacgccagcgggctggtgccg
cgcgaggtgaacggcatgccgctgtggccgctggacctgggcgagggggcgcaggccgag
gtggccctggtgtccatgggcaacccgcacgccgtgctgcgggtggatgacgtggccacc
gccccggtggccgactggggcccgaagatcgaggcccacccgcgtttcccgcgcaaggtc
aacgccggcttcctgcaggtgcgctcgcgcagcgaggtggccttgcgtgtgttcgagcgc
gacgcgggcgagaccctggcctgcggcaccggtgcctgcgcggcggtggtggccggcatc
cgcctgggctggctggatgccacggtggatgtgcacacccgcggcggcgtgctgaccatc
agctgggccggcgagggccattcggtgatgatgaccggtcccgcggtgaccgtctttgaa
ggagagatcgagctgtga

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