Ideonella dechloratans: LRM40_15015
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Entry
LRM40_15015 CDS
T07737
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idc03009
]
LRM40_15015
Enzymes [BR:
idc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LRM40_15015
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LRM40_15015
Ribosome biogenesis [BR:
idc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LRM40_15015
23S rRNA modification factors
LRM40_15015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_12
SYY_C-terminal
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UFU09600
LinkDB
All DBs
Position
3242068..3242823
Genome browser
AA seq
251 aa
AA seq
DB search
MRADQLLVQQGLAPSRSAAQRLIERGAVRWLGPRGWQQPKKAGEDLPAGCEIEVTDDAEL
RWASRGGLKLEGALREAGLDLHDTVALDVGQSTGGFTDVLLHAGCRRVVGVDVGRDQLLP
RLRQDPRVTALEGINARELSPAALGTAWPAEGFDLITGDLSFISLSLVLPALAPLLAPGG
TLLMLVKPQFELQPGDIGKGGLVKDQAAHARVETRLREACAACGLAVTAWRDSPITGGDG
NREFFVQAQRA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccgaccagcttctcgttcagcagggcctggcgcccagccggtcggccgcacag
cggctgatcgagcgcggcgccgtgcgctggctcggcccgcgaggctggcagcagcccaag
aaggcgggtgaggatctgcccgcgggctgcgagatcgaggtcaccgacgatgccgagctg
cgctgggcctcgcgcggcggcctcaagctcgaaggcgcgctgcgcgaagccggcctggac
ctgcatgacacggtggcgctggacgtgggtcagagcaccggcggcttcaccgacgtgctg
ctgcacgccggctgccgtcgggtggtgggtgtggacgtgggccgcgaccagctgctgccc
cggctgcgccaggacccgcgggtgacggcgctggaaggcatcaacgcccgcgagctcagc
cccgccgccctcggcacggcctggcccgcagagggcttcgacctgatcaccggcgacctg
tccttcatctcgctgagcctggtgctgcccgccctggcgccgctgctggcgcccgggggc
acgctgctgatgctggtcaagccgcagttcgagctgcagcccggcgacatcggcaagggc
gggctggtcaaggaccaggccgcccacgcccgggtggagacccggctgcgcgaggcctgc
gccgcctgcggcctggccgtcaccgcctggcgcgacagccccatcaccggcggcgacggc
aaccgcgaatttttcgttcaggcgcaacgtgcctga
DBGET
integrated database retrieval system
