Ideonella dechloratans: LRM40_15110
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Entry
LRM40_15110 CDS
T07737
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
idc
Ideonella dechloratans
Pathway
idc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM40_15110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_15110
Enzymes [BR:
idc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LRM40_15110
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRM40_15110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFU09619
LinkDB
All DBs
Position
complement(3260758..3261615)
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AA seq
285 aa
AA seq
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MPWTERQQALLQGMGLRIWSPPPAALRPAAPQAAPAIVPLAVQAPVEAPTPAVTQGGEPA
PAHPVVSARTPPAAPAAAAVPPPSAPSPQAAGVAAMDWPALREAVAGCQACALCESRRNT
VFGVGHPSAEWMIVGEAPGEQEDKQGEPFVGAAGQLLDAMLQAVGLTRSEADAAHQVFIA
NTLKCRPPRNRNPQPEELAQCAPFLHRQIALVRPKVLLAMGRFAIQQLLGRDEPIGRLRG
QVHDYHGTPVIVTYHPAYLLRQPTEKAKAWEDLCLAVSVYRQRQG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggactgagcgccagcaggccctcttgcagggcatgggcctgcgcatctggagc
ccgccgcccgctgcgctgcggccggccgcaccccaggcggctcctgcgatcgtccccttg
gcggttcaggcgccggtcgaggcgccgacaccggcggtcacccaggggggggagcccgcc
ccggcgcatcccgtggtgtccgcgcggacgccgcctgccgctcccgctgccgcggcagtg
ccgccgccctcggccccgtcgccgcaggccgccggcgtggccgcgatggactggcccgcg
ctgcgcgaggccgtggccggctgccaggcctgcgccctgtgcgagagccgcaggaacacc
gtcttcggcgtggggcacccctcggccgaatggatgatcgtcggcgaggcgccgggcgag
caggaggacaagcagggcgagcccttcgtcggcgcggccggacagttgctcgacgcgatg
ctgcaggccgtcggcctgacccggtccgaggccgacgcagcccaccaggtcttcatcgcc
aacaccctcaagtgccggccgccgcgcaaccgcaacccgcagcccgaggaactggcacag
tgcgcgcctttcctgcaccggcagatcgccctggtgcggcccaaggtgctgctggccatg
ggacgcttcgccatccagcagctgctgggccgggacgaacccatcggccgcctgcgcggc
caggtgcacgactaccacggcaccccggtgatcgtgacctaccacccggcctacctgctg
cgccagcccaccgagaaggccaaggcctgggaggacctgtgcctggcggtctcggtctac
cggcagcgccagggctga
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