Ideonella dechloratans: LRM40_15580
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Entry
LRM40_15580 CDS
T07737
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
idc
Ideonella dechloratans
Pathway
idc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM40_15580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_15580
Enzymes [BR:
idc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LRM40_15580
DNA repair and recombination proteins [BR:
idc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRM40_15580
Prokaryotic type
LRM40_15580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFU09702
LinkDB
All DBs
Position
complement(3345480..3346280)
Genome browser
AA seq
266 aa
AA seq
DB search
MVRPRKTQPAAQTGFWPADDVVAAPAASADNRLTAPADAWLAATAPDWQPLVQAWRDSPA
GQGLLVHLAARQAAGATVYPAWPLRALALTPLAAVRVVILGQDPYHGPGQAEGLAFSVPP
GVKPPPSLRNIFVEQQRDLGVPMPSHGHLAAWAGQGVLLLNTVLTVEDGQPASHARRGWE
ALTDALIGAVAAQPRRIAFLLWGAHAQAKAALIEARGPGRHLLLQANHPSPLSARRPPVP
FIGCGHFSAVAQAVPGLDWRLETAPG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtcctcgcaagacacagcccgctgcccagacgggcttctggcctgccgacgac
gtggtcgccgctccggcggcgtcggccgacaatcggctgacggcaccggccgatgcctgg
ctggcggccacggcacccgactggcagccgttggtgcaggcctggcgtgacagccctgcg
ggccagggtctgctggtgcatctggccgcccgtcaggccgccggtgccaccgtctacccg
gcctggccgttgcgggcgctggcgctcacgccgctggcggcggtgcgggtggtgatcctg
gggcaggacccgtaccacggcccgggccaagccgaggggctggccttctcggtgcctccg
ggcgtgaagccgccgcccagcctgcgcaacattttcgtcgagcagcagcgggatctgggc
gtgcccatgccgtcgcacggccacctggcggcctgggccgggcagggcgtgctgctgctc
aacaccgtgctcacggtcgaggacggccagcccgcgtcccatgcccgccgcggctgggag
gccttgaccgatgccttgatcggcgccgtggccgcccagccgcggcgcatcgccttcctg
ctgtggggcgcccatgcccaggccaaggccgccttgatcgaggcccggggcccggggcgg
cacctgctgctgcaggccaaccacccttcaccgctgtccgcccgccgtccaccggtgccc
ttcatcggctgcggccatttctccgcggtggcccaggccgtgccgggcctggactggcgc
ctggagacggcgccgggttga
DBGET
integrated database retrieval system
