Ideonella dechloratans: LRM40_16100
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Entry
LRM40_16100 CDS
T07737
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idc03032
]
LRM40_16100
Enzymes [BR:
idc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LRM40_16100
DNA replication proteins [BR:
idc03032
]
Prokaryotic type
DNA Topoisomerases
LRM40_16100
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
UFU09803
LinkDB
All DBs
Position
complement(3445296..3447890)
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AA seq
864 aa
AA seq
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MSKSLIIAEKPSVAQDIVRALTPVAGKFEKLADHFENDRYVVTSAVGHLVEIKAPDDYDV
KRGKWSFANLPVVPPHFDLAPIDKAKARLTAVVKLVKRKDVTELINACDAGREGELIFRL
IVQYAGGAKGPIDKPVRRLWLQSMTPQAIRDGFEKLRSNEQMLGLADAARSRSEADWLVG
INGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKHVPRDYWEIKAEFGAQAG
VYEGKWFDPAFKKDPNDADKRADRLWNEADAQAIVEAVRGRSATVTEEAKPSSQACPGLY
DLTTLQREANSRFGFSAKTTLSLAQALYEKHKVLTYPRTDSRHLPEDYLSVVKQTFGMLA
EEDLPGPLQHLAQHARKGLKEGYIKPSKRVFDNAKVSDHFAIIPTLQAPKSLTEAEAKLY
DLVVKRFIAIFFPSAEYMVTTRITKVPVQGGVVHQFQTNGKVLVNPGWLAVYGKEAQDED
ANLVPVQPGEGVVTEEVALAALRTKPPARYTEATLLSAMEGAGKLIDDDELREAMAEKGL
GTPATRAAIIEGLITEKYMLREGRELMPTAKAFQLMTLLRGLGVEDLTKPELTGNWEYQL
AEMEQGKLSRERFMQDIAAMAERIVKKAKEYDRDTIPGDYATLQTPCPNCGGVVKENYRR
FTCTGASGDAEGCGFSITKIPAGRSFELPEVEQFLRDKHIGPLEGFRSKAGWPFTAELKL
VHDEEVKNWKLEFDFGEDAQQAEEGEPVDFSGQESLGPCPKCQGHVYEHGANYVCEHAVG
AHVTCDFKSGKVILTQPVDRGQFSKLLATGKTDLLENFVSNKTRRKFKAFLAYDKKEGKV
GFEFEPRAAKAPAKKAARKTSTAE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcactgatcattgcggaaaagcccagcgtggcgcaggacatcgtccgggcg
ctgacgccggtggccggcaagttcgaaaaactggccgaccatttcgagaacgaccgctat
gtggtcacttcggcggtgggccacctggtggagatcaaggcgccggacgactacgacgtc
aagcgcggcaagtggagcttcgccaacctgccggtggtgccgccgcatttcgacctggcg
cccatcgacaaggccaaggcgcggctcaccgcggtggtcaagctggtcaagcgcaaggac
gtgaccgagctgatcaacgcctgtgacgcggggcgcgaaggggagctgatcttccgcctg
atcgtccagtacgccggcggcgccaaggggccgatcgacaagccggtgcggcgcctgtgg
ctgcagagcatgacgccccaggccatccgtgacggtttcgagaaactgcgcagcaacgag
cagatgctgggcctggccgacgcggcgcgcagccgctccgaggccgactggctggtgggc
atcaacggcacgcgggccatgacggccttcaattcgcgcgacggcggcttcttcctgacc
accgtcggccgggtgcagacgcccacgctgtccatcgtcgtcgagcgcgaggagaagatc
cgcaagcacgtgccgcgcgactactgggagatcaaggccgagttcggcgcccaggctggc
gtgtacgagggcaagtggttcgacccggccttcaagaaggacccgaacgacgccgacaag
cgcgctgaccggctctggaacgaggccgatgcccaggccatcgtcgaggctgtgcgtggc
cgcagcgccaccgtcaccgaggaggccaagcccagcagccaggcctgcccgggcttgtac
gacctgaccacgctgcagcgcgaggccaacagccgcttcggcttctcggccaagaccacg
ctgtcgctggcccaggccctgtatgaaaagcacaaggtgctgacctacccccggacggat
tcacgccacctgccggaggactacctcagcgtggtcaagcagaccttcggcatgctggcc
gaggaggacctgcccggcccgctgcagcacctggcccagcacgcccgcaagggcctcaag
gagggctacatcaagcccagcaagcgcgtcttcgacaacgccaaggtgtcggaccacttc
gccatcatccccacgctgcaggcgcccaagagcctgaccgaggccgaggccaagctctac
gatctggtcgtcaagcgcttcatcgccatcttcttcccctcggccgagtacatggtcacc
acccgcatcaccaaggtgccggtgcaaggcggtgtcgttcaccagttccagaccaacggc
aaggtgctggtcaaccccggctggctggccgtctacggcaaggaagcccaggacgaggac
gccaatctggtgccggtgcagcccggcgagggcgtggtgaccgaggaggtggccctggcc
gccctgcgcaccaagccgccggcccgctacaccgaagccacgctgctgtcggccatggaa
ggcgcgggcaagctgatcgacgacgacgagctgcgcgaggccatggccgagaagggcctg
ggcacgccagccacccgtgcggccatcatcgaaggcctgatcaccgagaagtacatgctg
cgcgaaggccgcgagctgatgcccacggccaaggccttccagctgatgaccctgctgcgc
ggcctgggcgtggaggacctgaccaagcccgagctgaccggcaactgggagtaccagctc
gccgagatggagcagggcaagctctcgcgcgagcgcttcatgcaggacatcgcggcgatg
gccgagcgcatcgtcaagaaggccaaggaatacgaccgcgacaccatcccgggcgactac
gcgacgctccagacgccctgcccgaactgcggcggcgtggtcaaggagaactaccgccgc
ttcacctgcaccggggcttcaggggatgccgagggctgcggcttctcgatcaccaagatt
ccggccgggcgcagcttcgagctgcccgaggtggagcaattcctgcgcgacaagcacatc
ggtccgctggaaggcttccgctccaaggcgggctggcccttcacggcggaactcaagctg
gtccacgacgaggaagtgaagaactggaagctggagttcgacttcggcgaggatgcccag
caggccgaggaaggcgagccggtggacttctccggccaggagagcctgggcccctgcccc
aagtgccagggccacgtctacgagcacggtgccaactacgtctgcgagcacgcggtgggc
gcgcacgtgacctgcgacttcaagagcggcaaggtcatcctgacccagccggtggaccgc
gggcagttcagcaagctgctggccaccggcaagaccgacctgctggagaacttcgtctcc
aacaagacgcgccgcaagttcaaggccttcctggcctacgacaagaaggaaggcaaggtg
ggcttcgagttcgagccccgcgccgccaaggcgccggccaagaaggccgcccgcaagacc
tccaccgccgagtga
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