Ideonella dechloratans: LRM40_16160
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Entry
LRM40_16160 CDS
T07737
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
idc
Ideonella dechloratans
Pathway
idc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRM40_16160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idc02000
]
LRM40_16160
Transporters [BR:
idc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LRM40_16160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
UFU09815
LinkDB
All DBs
Position
complement(3461550..3462314)
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AA seq
254 aa
AA seq
DB search
MSDSTVVRDEQEAASAGGWRRRHLGRVVLSCLGLSVGPACAAESRTLRVLAWPGYADPDL
VHRFEQNLAARVELTIVDTDQALWHHMQPGPGANFDVVAVNTAELQRYIQLNAVQPLQLK
SLPGRQRQLARFQALESIPGLVHDGRSYAIPYAWSEMGLIYHPDHFATPPASIAALWDPR
LQGRVLAYDGGTHAFSLAAQKLGLPSPFRIPASQWPMLVESLVALRRNVSGFYTLPEESL
DLYRRRGAWLMLAN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcgaccgtggttcgtgacgagcaggaggctgcgtcggcaggggggtggcgt
cggcgccatctgggccgcgtcgtgctgtcctgtctggggctgagtgtcgggcccgcctgc
gccgccgaaagccgcacgctgcgggttctcgcctggcccggctatgccgatccggacctg
gtgcaccgcttcgagcagaacctggccgcgcgggtcgaactcaccatcgtcgacaccgac
caggccctgtggcaccacatgcagcccgggcccggggccaacttcgacgtcgtggccgtc
aacacggccgagctgcagcgctacatccagctgaacgccgtgcagcccctgcagctcaag
agcctgccggggcggcaacggcagttggcgcgcttccaggccctggaaagcattcccggg
ctggtgcatgacggccgcagctacgccatcccctacgcctggagcgagatggggctgatc
taccacccggaccatttcgccacgccgccggcgtccattgcggcgctgtgggatccgcgt
ctgcaggggcgggtgctggcctatgacggcggcacccacgccttctcgctggcggcgcag
aagctgggcctgccctcgcccttccgcattccggcgtcccaatggccgatgctggtggag
agcctggtggcgctgcgccgcaacgtcagcggcttctacacactgccggaggaatcgctg
gacctctaccggcgccgcggcgcctggctgatgctggcgaactag
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