Ideonella dechloratans: LRM40_16565
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Entry
LRM40_16565 CDS
T07737
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
idc
Ideonella dechloratans
Pathway
idc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRM40_16565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idc02000
]
LRM40_16565
Transporters [BR:
idc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LRM40_16565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UFU09887
LinkDB
All DBs
Position
3554048..3555898
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AA seq
616 aa
AA seq
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MSDLPPHPGRRQWLQTTGLAGAAALLGSQSAAAGTATASAASPKVLRYAFKAAETGFDPA
KIQDLYSRILTAHIFEGLYVYDHLARPAKVRLLTAAALPEISPDFRVYVIKVQPGIYFMS
DPAFKGRKRELVAEDYVYAIKRFADPANKSPAWGDLEEANFVGLAALREECLQKRQPFDY
DRVVPGLRALDRYTLRLEVAAGRPRLIELLTGSDLFGAVAREVVEFYGPEEIMGHPVGTG
PFKLVQWRRSSLIALERNPEYRERLYDAEPAADDAEGQALLARFKGRRLPMIDRVEVSII
EESQPRWLSFLNGQQNFIERVPEEFATLAMPNGRLAPNLAHQHMQGYRSLAPDIGYTLYN
MEDPVVGGYTPEKIALRRAMNLGMDIPREIALVRQGQGIPAQSLIVPNTSGYDPNFRSEM
GQYDPARAKALLDIYGYVDRDGDGWREQPDGSPLLIRRASQPDQFYRSLDELWQRNMQAI
GIRGVIEPAKWPENLKAAQAGSLMSWFVNSSASQYDGQSGLGMMFSPKIGGDNMARFKSA
EFDALYLKMQALPDGPERWALFRQAQRIGIVYAPYKCHVHRYVTDVAAAEVQGYRRPPFW
NEWWQYVDIGPAPARA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacttgcccccgcaccccggccgccgccagtggctgcagaccaccggcctggcg
ggcgccgcagccctgctgggcagccagtcggccgccgccggcacggccacggcgtcagcc
gcctcgcccaaggtcttgcgctacgccttcaaggcggccgagaccggcttcgacccggcc
aagatccaggacctgtactcgcgcatcctcactgcgcacatcttcgagggcctctacgtc
tacgaccatctggcccgcccggcgaaggtcaggctgctcaccgcggcggcactgcccgaa
atctcgccggacttccgggtctacgtgatcaaggtgcagccgggcatctatttcatgtcc
gacccggccttcaagggccgcaagcgcgaactggtggccgaggactacgtctacgccatc
aagcgcttcgccgatccggccaacaagagcccggcctggggcgatctggaggaggccaac
ttcgtcggtctggccgcgctgcgcgaggaatgcctgcagaagcgccagcccttcgactac
gaccgggtggtgcccggcctgcgtgcgctggaccgctacaccctgcgcctggaggtggcc
gccggccggccccgcctgatcgagctgctgaccggcagcgacctgttcggcgccgtggcc
cgcgaggtggtggagttctacggccccgaagagatcatgggccacccggtgggcaccggc
cccttcaagctggtgcagtggcgccgcagctcgctgatcgcgctggagcgcaaccccgag
taccgcgagcgcctgtacgacgccgaaccggccgccgacgatgccgagggccaggccctg
ctggcgcgcttcaagggccgccgcctgcccatgatcgaccgggtcgaggtgtccatcatc
gaggagagccagccgcgctggctgtccttcctgaacgggcagcagaacttcatcgaacgg
gtgcccgaggagttcgccaccctggccatgcccaacggccgcctggcgcccaacctggcc
caccagcacatgcagggttaccgcagcctggcgccggacatcggctacaccctgtacaac
atggaagacccggtggtgggcggctacacgccggagaagatcgccctgcgccgggccatg
aacctgggcatggacatcccgcgcgagatcgcgctggtgcgccagggccagggcattccc
gcccagtcgctcatcgtgcccaacaccagcggctacgacccgaacttccgctccgagatg
gggcagtacgacccggcgcgcgccaaggccctcttggacatctacggctacgtggaccgc
gacggcgacggctggcgcgagcagcccgacggctcgccgctgctgatccgccgcgcctcc
cagcccgaccagttctaccgctcgctcgacgagctgtggcagcgcaacatgcaggccatc
ggcatccgcggggtgatcgagcccgccaaatggcccgagaacctcaaggcggcccaggcc
ggctcgctgatgagctggttcgtgaactcctcggccagccagtacgacggccagagcggc
ctgggcatgatgttcagccccaagatcggcggcgacaacatggcccgcttcaagagcgcc
gagttcgatgccctctacctgaagatgcaggccctgcccgacggcccggaacgctgggcc
cttttccgccaggcccagcgcatcggcatcgtctacgcgccgtacaaatgccatgtgcac
cgctacgtcaccgacgtggcagccgccgaggtgcagggctaccgccgccccccgttctgg
aacgagtggtggcagtacgtggacatcgggcccgcgccggcccgggcctga
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