Ideonella dechloratans: LRM40_16750
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Entry
LRM40_16750 CDS
T07737
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
idc
Ideonella dechloratans
Pathway
idc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM40_16750 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_16750 (xth)
Enzymes [BR:
idc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LRM40_16750 (xth)
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LRM40_16750 (xth)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Glyco_hydro_47
Motif
Other DBs
NCBI-ProteinID:
UFU11923
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All DBs
Position
3596670..3597452
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AA seq
260 aa
AA seq
DB search
MLRVISANLNGVRSASTKGFFDWMAQQDADFVCVQELKAQESDMAPGMLAPTGYQGYFHY
AEKKGYSGVGIYARHPPLKVVVGLGVPEIDAEGRYIELVYDRLSVVSVYLPSGSSGEHRQ
AAKFDFMEHFYRHLGGLVACGREVVICGDWNIAHKEADLKNWKGNLKNSGFLPEERAWLT
RVFDELGWVDTYRRLEPDATESGYTWWSNRGQAWAKNVGWRIDYQICSRPLAYCARSASI
YKTERFSDHAPLIIEYDFSF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagtcatttccgccaacctgaacggcgttcgttccgcttcaacgaaggggttc
ttcgactggatggcccagcaggatgccgacttcgtttgcgtgcaggagctcaaggcgcag
gagtccgacatggcgccgggcatgctggcgccgaccggctaccagggctacttccactac
gccgagaagaagggttacagcggcgtcggcatctacgcgcggcatccgcctctgaaggtg
gtggtcggcttgggcgttccggagatcgacgccgaggggcgctacatcgagttggtgtac
gaccgcctctcggtggtgtcggtctacctgccgtccggatccagcggcgaacaccgtcag
gccgccaagttcgacttcatggagcacttctatcggcacttgggcggcctggtcgcatgc
gggcgcgaggtggtgatctgcggcgactggaacatcgcgcacaaggaagctgacctgaag
aactggaagggcaacctgaagaactcgggcttcctcccggaggagcgggcttggctgacg
cgggtgttcgacgaacttggctgggtggacacgtatcgtcggctagaacctgacgcaact
gagtccggatacacatggtggagcaatcgcgggcaggcttgggcgaagaacgttggatgg
cgaatcgactatcagatttgttccagaccgctagcctattgcgcgcggagtgcttcaatc
tacaagacggagcggtttagtgaccacgctccgctcattattgaatacgacttcagtttc
taa
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