Ideonella dechloratans: LRM40_16860
Help
Entry
LRM40_16860 CDS
T07737
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
idc
Ideonella dechloratans
Pathway
idc00020
Citrate cycle (TCA cycle)
idc00640
Propanoate metabolism
idc00660
C5-Branched dibasic acid metabolism
idc00720
Other carbon fixation pathways
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
Module
idc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
idc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRM40_16860 (sucD)
00640 Propanoate metabolism
LRM40_16860 (sucD)
00660 C5-Branched dibasic acid metabolism
LRM40_16860 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LRM40_16860 (sucD)
Enzymes [BR:
idc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LRM40_16860 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UFU09944
LinkDB
All DBs
Position
3619678..3620571
Genome browser
AA seq
297 aa
AA seq
DB search
MSIYINKDTKVITQGITGKTGQFHTLGCQAYANGKNAFVAGVNPKKAGEKFSDIPIYASV
KEAATQTGATVSVIYVPPAGAADAIWEAVEADLDLVIAITEGIPVRDMLMVRNKMKAKEA
AGGKKTLLLGPNCPGLITPEEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVAQLTEIGLG
QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNMKKPIV
GFIAGVTAPPGKRMGHAGALISGGADTADAKLAIMEECGFKVTRNPSEMGKLLKAML
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctacatcaacaaggacaccaaggtcatcacccaggggatcaccggcaagacc
ggccagttccacaccctgggctgccaggcctatgccaacggcaagaacgccttcgtcgcg
ggcgtgaaccccaagaaggccggcgagaagttctccgacatccccatctacgcctccgtc
aaggaagcggccacgcagaccggcgccaccgtgtcggtgatctacgtgccgcccgccggc
gccgctgacgccatctgggaagccgtcgaggccgacctggacctggtgatcgccatcacc
gagggcatccccgtgcgcgacatgctgatggtgcgcaacaagatgaaggccaaggaagcc
gctggcggcaagaagacgctgctgctgggccccaactgccccggcctgatcacgccggaa
gaaatcaagatcggcatcatgccgggccacatccacaagaagggccgcatcggcgtcgtg
tcgcgctcgggcacgctgacctatgaagccgtggcccagctcaccgagatcggcctgggc
caatcctccgcggtgggcatcggtggcgacccgatcaacggtctgaagcacatcgatgtg
atgaaggccttcaacgacgatccggacaccgacgccgtcatcatgatcggcgagatcggt
ggcccggacgaggccgaagccgcccgctggtgcaaggacaacatgaagaagccgatcgtc
ggcttcatcgccggtgtcaccgcccctcccggaaagcgcatgggccacgccggcgcgctg
atctccggcggtgccgacaccgccgatgccaagctggccatcatggaagagtgcggcttc
aaggtgacccgcaacccgtccgagatgggcaagctgctcaaggccatgctgtaa
DBGET
integrated database retrieval system
