Ideonella dechloratans: LRM40_18160
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Entry
LRM40_18160 CDS
T07737
Name
(GenBank) ATP-dependent DNA ligase
Organism
idc
Ideonella dechloratans
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DUF2249
RNA_ligase
DUF6926
Motif
Other DBs
NCBI-ProteinID:
UFU12318
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Position
unnamed1:complement(55932..57623)
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AA seq
563 aa
AA seq
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MKAFSALYQALDASTATRDKLDALKRHLARAEARDAAWAVYLLAGGRPRRAVPTAELRAL
ACEIAGLPDWLFEAGYAATGDLAEAIAYVLPAPGRQHGGSLADWMEQRIAPLRELPPAER
AEAVRAAWDGLAADERFLFVKLVGGGFRVGVSRGLVQRALAELHGLPPALVAQRMMGFTD
GQRPPSAAAYQALVAPEAPAGSGPRGGQPYPFFLAQPLADGPDALGARDGWWAEWKYDGI
RAQVVKRESQVWIWSRGEELVSERFPEVLAAARLWPDGTVVDGELLAWRAGEADPAPFAL
LQKRIGRTRLGPAILAEAPVRLLAYDLLEDAGQDLRDQPLHARRARLAALGIPASPLLAA
HDWAGLATLRAQARAHRVEGLMLKHRDSAYGLGRTGSGPAAWWKWKLAPLAVDALLIYAQ
AGHGRRANLYTDYSFAVWSRAPRDAAEAAAVLDGAADAPADLQLVPFAKAYSGLSDDEIR
RVDRVVRQTTLEKFGPVRRLRPTLLFELGFEGIQPSARHKSGLAVRFPRMLRWREDKPLH
EADTLASLQALMAATNGEAPDGD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttcagcgcgctctaccaggccctggacgccagcaccgccacgcgcgacaag
ctcgacgccctgaaacgccacttggcccgggccgaggcccgcgatgccgcctgggcggtc
tacctgctggccggcggccggccgcgccgggccgtgcccaccgccgagctgcgcgccctg
gcctgcgagatcgccggcctgccggactggctgttcgaagccggctacgccgccaccggc
gacctggccgaggccatcgcctacgtgctgcccgcccccggccggcagcacggcggcagc
ctggccgactggatggagcagcgcatcgccccgctgcgcgagctgccgccggccgaacgg
gccgaggcggtgcgcgcggcctgggacgggctggcggccgacgagcgctttctcttcgtc
aagctggtgggcgggggcttccgggtgggcgtgagccggggcctggtgcagcgcgcgctg
gccgagctgcacggcctgccacccgccctggtggcgcagcgcatgatgggcttcaccgac
ggccagcgcccgcccagcgccgcggcctaccaggccctcgtcgcccccgaggccccggcc
ggcagcggcccgcgcggcggccagccctatcccttcttcctggcccagccgctggccgat
gggcccgacgccctgggcgcgcgcgatggctggtgggccgagtggaagtacgacggcatc
cgggcccaggtggtcaagcgcgagagccaggtgtggatctggtcgcgcggcgaggagctg
gtgagcgagcgcttccccgaggtgctggccgccgcccggctctggcccgacggcacggtg
gtcgacggcgaactgctggcctggcgcgcgggcgaagccgaccccgcgcccttcgccctg
ctgcaaaagcgcatcggccgcacccggctgggcccggccatcctggccgaggccccggtg
cgcctgctggcctacgacctgctggaggacgccggccaggacctgcgggaccagcccctg
cacgcgcgccgcgcgcggctggcggccctgggcatcccggccagcccgctgctggccgcg
cacgactgggccggcctggccaccctgcgcgcccaggcccgggcccaccgggtcgagggc
ctgatgctcaagcaccgcgacagcgcctatggcctgggccgcaccggcagcggcccggcc
gcctggtggaagtggaagctggccccgctggcggtggacgcgctgctcatctacgcccag
gccggccacggccgccgcgccaacctctacaccgactacagcttcgccgtctggagccgt
gccccgcgcgacgcggccgaggccgccgccgtgctggacggtgccgccgacgcgccggcc
gacctgcagctggtgccctttgccaaggcctactccggcctcagcgacgacgagatccgc
cgggtggaccgggtggtgcgccagaccacgctggaaaagttcggcccggtgcggcggctg
cggcccacgctgctgttcgagctgggcttcgagggcatccagcccagcgcccgccacaag
agcgggctggcggtgcgctttccgcgcatgctgcgctggcgcgaggacaagcccctgcac
gaggccgacaccctggcctcgctgcaagccctgatggctgccacgaacggggaagccccc
gatggcgactga
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