Ideonella dechloratans: LRM40_19865
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Entry
LRM40_19865 CDS
T07737
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
idc
Ideonella dechloratans
Pathway
idc03030
DNA replication
idc03430
Mismatch repair
idc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRM40_19865
03430 Mismatch repair
LRM40_19865
03440 Homologous recombination
LRM40_19865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idc03032
]
LRM40_19865
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_19865
Enzymes [BR:
idc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRM40_19865
DNA replication proteins [BR:
idc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRM40_19865
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRM40_19865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UFU11993
LinkDB
All DBs
Position
unnamed1:complement(419962..420648)
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AA seq
228 aa
AA seq
DB search
MIADSAENSVETLAVIDFETTGMGPQQGARATEIAAVLLRGGQVVGHYQSLMRSDVRVPP
FIERLTGISNAMLAQAPPAEQVMREVLDFVGDCPLVAHNAAFDRGFWLAEAARAGRPLGE
GPGFACTLLLSRRLFDQAPSHRLSDLAGWLGLARDGRAHRALSDATLTAHLLARLQDEVA
RRFEDRLDGMPVGHATLCRLQRAPRQRLDQALGVPAAVSVGKLSRRAG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgattccgcggagaactcagtagaaaccctagccgtcatcgacttcgaaacc
accggcatggggccccagcagggggcccgggccaccgagatcgcggccgtgctgctgcgc
ggcggccaggtggtgggccactaccagagcctgatgcgctcggatgtgcgggtgccgccc
ttcatcgagcgcctgaccggcatcagcaacgcgatgctggcccaggccccgccggccgag
caggtgatgcgcgaggtgctggacttcgtcggcgactgcccgctggtggcccacaacgcc
gccttcgaccgcggtttctggctggccgaggccgcccgggccggccgcccgctgggcgaa
ggccccggtttcgcgtgcaccctgctgctgagccggcgcctgttcgaccaggcgccctcg
caccggctgagcgatctggccggctggctgggcctggcgcgcgacggccgggcccaccgg
gccctgtccgacgccaccctcacggcccacctgctggcccgactgcaggacgaggtggcc
cggcgcttcgaggaccggctggacggcatgccggtggggcacgccacgctgtgccgactg
cagcgggccccgcgccagcgtctggaccaggccctgggtgtgcctgccgcggtgagcgtc
ggcaagctgtcacggcgcgccggataa
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