Ideonella dechloratans: LRM40_19875
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Entry
LRM40_19875 CDS
T07737
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idc02000
]
LRM40_19875
Transporters [BR:
idc02000
]
Other transporters
Pores ion channels [TC:
1
]
LRM40_19875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UFU11995
LinkDB
All DBs
Position
unnamed1:421721..423559
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AA seq
612 aa
AA seq
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MFLRTPVALAVALSAPVFVHAQTSGTNLPATDTTDYVVTASRMPESAAQAVRPVTVITAE
DIRQSGAGSVTDLLRTLGGVEITQNGGLGSSSSVFIRGANSDHTVVLVDGVRIGSATLGT
AAFESIPLALIERIEVLPGPSSSLYGSDAIGGVIQIFTKSAKRSPGASVALTAGSHDLRQ
AAASYAAALGEGTQLSLGLNYLSTDGINATTPDNTYNYNPDRDGLLQRSGQLRLTQQINA
DHEVGVQWLRSASKGRFDDGPGIDSYSDSLTQTLGAHWNGQLAQSWRSELSVARSLDQST
AHSSFPGTFDTREDQASWLNRLAAFGGTATVGLEWLKQSVDSTTAYTVDQRTVRSALVGW
KGQIGEHALQADVREDRNSQFGHHTTAQLGWGWQLAQDWRLRAAWGSAFHAPTFNTLYYP
GFGNADLKPEKSDSYELGLDGKLAGLELGATVFDNHIRDLIDYAPPDYLPANVNKARITG
LSLKLGGLLIDRDTRFKANLTWQDPKNDETEQMLRRRARVYGGLHLTHNAGPAQIGTDLS
WVGRRYDSADQSAGSAMGAYGLVAVFGSWAFTPEWRLEARVNNLGDKRYTTAQGYSAPGR
EGQVTLRWTPAL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcgcacgcctgtcgcgcttgccgtggcgctgtccgcgcccgtgttcgtccac
gcccagacttcgggcacgaaccttcccgccaccgacaccaccgactacgtcgtcaccgcc
agccgcatgcccgaatcggctgcgcaggccgtgcggccggtcaccgtcatcaccgccgag
gacatccgccagtccggcgccgggtccgtcaccgacctgctgcgcaccttgggtggcgtg
gagatcacccagaacggcggcctgggcagcagcagcagcgtgttcatccgcggtgccaac
agcgaccacacggtggtgctggtcgacggtgtgcgcatcggctcggccaccctgggcacc
gccgccttcgagtcgattccgctcgccctgatcgagcgcatcgaggtgctgcccggcccc
tccagcagcctgtacggctcggacgccatcggcggcgtgatccagatcttcaccaagagc
gccaagcgctcgccgggtgcctccgtggccctgaccgccggcagccacgatctgcgccag
gccgcggccagctatgccgccgccctgggcgaaggcactcagctttcgctgggcttgaac
tacctgagcaccgacggcatcaacgccaccacgccggacaacacctacaactacaacccc
gaccgcgacggcctgctgcagcgcagcgggcaactgcggctgacccagcagatcaacgcc
gaccacgaggtgggcgttcagtggctgcgcagtgccagcaagggccggttcgacgacggt
cccggcatcgacagctacagcgactccctcacccagaccctgggggcgcactggaacggc
cagctggcccagagctggcgcagcgaactgagcgtggcccgctcgctggaccagtccacc
gcccacagcagcttccccggcactttcgacacccgcgaagaccaggccagctggctcaac
cgcctggccgccttcggtggcacggccaccgtgggcctggaatggctcaagcagagcgtg
gacagcaccaccgcctacaccgtggaccagcgcaccgtgcgcagcgccctggtgggctgg
aagggccagatcggcgagcacgcgctgcaggccgatgtgcgcgaggaccgcaacagccag
ttcggccaccacaccacggcccagctgggctggggctggcagctggcgcaggactggcgc
ctgcgggccgcctggggcagtgccttccatgcgccgaccttcaacaccctgtactacccc
ggcttcggcaatgccgatctgaagcccgagaagtccgacagctatgagctgggcctggac
ggcaagctggctggcctggagctgggcgccacggtgttcgacaaccacatccgcgacctg
atcgactacgcgccgcccgactatctgccggccaacgtcaacaaggcccgcatcaccggc
ctgagcctgaagctgggcggcctgctgatcgaccgcgacacccgcttcaaggccaacctg
acctggcaggacccgaagaacgacgagaccgagcagatgctgcgccgccgtgcgcgcgtc
tacggcggcctgcacctgacccacaacgccggcccggcccagatcggcaccgacctcagc
tgggtggggcgtcgctacgattcggccgaccagtccgccggcagcgccatgggcgcctac
ggcctggtggccgtcttcggcagctgggccttcacgcccgagtggcgcctggaagcgcgg
gtgaacaacctgggtgacaagcgctacaccaccgcccagggctacagcgcgccgggccgc
gaaggccaggtcacgctgcgctggacgccggcgctctga
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