Ideonella dechloratans: LRM40_20050
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Entry
LRM40_20050 CDS
T07737
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
idc
Ideonella dechloratans
Pathway
idc00910
Nitrogen metabolism
idc01100
Metabolic pathways
idc01120
Microbial metabolism in diverse environments
idc01310
Nitrogen cycle
Module
idc_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LRM40_20050 (nirB)
Enzymes [BR:
idc01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
LRM40_20050 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
Rubredoxin_C
NIR_SIR_ferr
FAD_binding_2
Pyr_redox_3
NAD_binding_8
Lys_Orn_oxgnase
DUF6344
Motif
Other DBs
NCBI-ProteinID:
UFU12025
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All DBs
Position
unnamed1:complement(454801..457341)
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AA seq
846 aa
AA seq
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MKIVVAGHGMVGHQFLQSLAETGLTEAQVTVLCEEARPAYDRVHLSEFFAGKSAQDLSLV
EPGFFERTGFDLRLAARAASVDRRVRTVTTADGEVLPYDVLVLATGSVPFVPPIAGRERP
NCFVYRTIDDLEAMQAASAKARRGVVVGGGLLGLECAKALRDLGLETHVVEFAPRLMAVQ
VDESGGRILREKIEALGVHVHTRRSTTQITDGAEHRHRMVFEDGSYLETDLIVFSAGIRP
RDELARQCVLAIGPRGGVVIDDHCRSSDPHVYAIGECASWNEQTFGLVAPGYEMARVAAR
HIAGEAAAAFAGADMSTKLKLMGVDVASIGDAHGKTPHCRSFSFTDELNGIYKKIVVSED
GRQLLGAVLVGDAAEYGTLLQMALNGIALPEHPEALILPAGDGQAKAGLGVDALPDSAQI
CSCNNVSKGQIAEAVAGGATTIAALKAGCKAGATCGGCVPLVTQVMKAEMARRGLAVNNH
LCEHFPHSRQELFHLVRVGQIKTFEDLLAKHGQGLGCDICKPAAASIFASCWNDFVLQPE
LAPLQDSNDYFLGNIQKDGSYSVVPRMPGGEVTPEGLIAVGQVAKKYGLYTKITGGQRVD
LFGARVEQLPLIWEELIAAGFESGHAYGKSLRTVKSCVGSTWCRYGVDDSTGLAIALENR
YKGLRAPHKIKFGVSGCTRECAEAQSKDVGIIATDKGWNLYVCGNGGMKPRHAELIASDL
SKDALIRLIDRFLMFYVRTADRLQRTSTWRDNLEGGLDYLKGVLLRDTLGLAAELEAQMQ
QVVDRYQCEWKTAVTTPAVRQRFRSFVNSTQPDEHIVFVQERGQIRPARPEERADATHAA
STNSPT
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtcgtcgccggccacggcatggtgggccaccaattcctgcagagcctggcc
gagaccggcctgaccgaggcgcaggtcaccgtcctgtgcgaggaagcccgcccggcctac
gaccgggtccacctctccgagttcttcgccggcaagtccgcccaggatctgtccctggtc
gagcccggcttcttcgagcgcaccggcttcgacctgcgcctggcggcccgggccgccagc
gtggaccgccgggtgcgcaccgtgaccaccgccgatggcgaggtgctgccctacgacgtg
ctggtgctggccaccggctcggtgcccttcgtgccgcccatcgccggtcgcgagcggccg
aactgcttcgtctaccgcaccatcgacgatctggaggccatgcaggccgccagcgccaag
gcccggcgcggcgtggtggtgggcggcggtctgctgggcctggaatgcgccaaggccctg
cgcgacctcgggctggagacccatgtggtggaattcgccccgcgcctgatggcggtgcag
gtggacgagagcggcggccgcatcctgcgcgagaagatcgaggccctgggtgtgcacgtg
cacacccggcgcagcaccacccagatcaccgacggcgccgagcaccgccaccgcatggtg
ttcgaggacggcagctacctggaaaccgacctgatcgtgttctccgccggcatccggccg
cgcgacgaactcgcccgccagtgcgtgctggccatcggcccgcgcggcggcgtggtgatc
gacgaccactgccgcagcagcgatccgcacgtctacgccatcggcgagtgcgcgtcctgg
aacgagcagaccttcggcctggtggccccgggctacgagatggcccgcgtggccgcgcgc
cacatcgccggcgaggccgcggccgccttcgcgggcgccgacatgagcaccaagctcaag
ctgatgggcgtggacgtggccagcatcggcgatgcccacggcaagacgccgcactgccgc
agcttctccttcaccgacgaactgaacggcatctacaagaagatcgtcgtcagcgaggac
ggccgccagctgctgggggccgtgctggtgggcgacgcggccgagtacggcaccctgctg
cagatggccttgaacggcatcgccctgcccgagcatcccgaggcgctgatcctgccggcc
ggcgacggccaggccaaggccggcctgggcgtggacgccctgcccgacagcgcgcagatc
tgctcctgcaacaacgtcagcaagggccagatcgccgaggcggtggccggcggcgccacc
accatcgccgcgctgaaggccggctgcaaggccggcgccacctgcggcggctgcgtgccc
ctggtcacccaggtcatgaaggccgagatggccaggcgcggcctggcggtgaacaaccac
ctgtgcgagcacttcccgcactcgcgccaggagctgttccacctggtccgcgtgggccag
atcaagactttcgaggacctgctggccaaacacggccagggcctgggctgcgacatctgc
aagcccgcggcggccagcatcttcgcctcctgctggaacgacttcgtgctgcagcccgag
ctggcgcccctgcaggacagcaacgactacttcctgggcaacatccagaaggacggcagc
tactcggtggtgccgcgcatgcccggtggcgaggtcacccccgagggcctgatcgccgtg
ggccaggtggccaagaagtacggcctgtacaccaagatcaccggcggccagcgggtcgac
ctgttcggtgcccgtgtcgagcagttgcccctgatctgggaggagctgatcgccgccggc
ttcgagagcggccatgcctatggcaagagcctgcgcaccgtgaagagctgcgtgggcagc
acctggtgccgctacggcgtggacgacagcaccggcctggccattgcgctggagaaccgc
tacaagggcctgcgcgcgccacacaagatcaagttcggcgtctcgggctgcacccgcgaa
tgcgccgaggcccagagcaaggacgtgggcatcatcgccaccgacaagggctggaacctc
tatgtctgcggcaacggcggcatgaagccgcgccacgccgagctgatcgccagcgacctg
agcaaggacgcgctgatccgcctgatcgaccgcttcctgatgttctacgtgcgcaccgcc
gaccgcctgcagcgcaccagcacctggcgcgacaacctcgaaggcgggctggactacctc
aagggcgtgctgctgcgcgacaccctggggctggccgccgagctggaggcccagatgcag
caggtggtggaccgctaccagtgcgaatggaagaccgccgtcaccacgcccgccgtgcgc
cagcgcttccgcagcttcgtcaacagcacgcagcccgacgagcacatcgtcttcgtgcag
gagcgcggccagatccgcccggcccggccggaggaacgcgccgacgccacccacgccgca
tccaccaacagccccacctga
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