Ideonella dechloratans: LRM40_21260
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Entry
LRM40_21260 CDS
T07737
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
idc
Ideonella dechloratans
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idc03032
]
LRM40_21260
03036 Chromosome and associated proteins [BR:
idc03036
]
LRM40_21260
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_21260
DNA replication proteins [BR:
idc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LRM40_21260
Chromosome and associated proteins [BR:
idc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LRM40_21260
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LRM40_21260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HTH_IclR
PT-TG
Motif
Other DBs
NCBI-ProteinID:
UFU12249
LinkDB
All DBs
Position
unnamed1:684117..684500
Genome browser
AA seq
127 aa
AA seq
DB search
MKKSELIELLATKAEVSKAAAARMLETLTQTVMTSVKKGESFTIAGFGTFKQAQRAARKG
RNPATGEAIKIGAMKTARFTPAAAFKAVVDPRAAAKKAAKKAEAAPAKKAVKAAAKAPAK
KAAAKKK
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagcgaactgattgaactgctggccaccaaggccgaggtgagcaaggcggcc
gcagcccgcatgctggagaccctgacccagaccgtgatgacctcggtcaagaagggcgag
agcttcacgatcgccggcttcggcaccttcaagcaagcccagcgcgccgcgcgcaagggc
cgcaaccccgccaccggcgaagccatcaagatcggcgccatgaagaccgcccgcttcacg
ccggccgccgccttcaaggccgtggtggatccgcgcgccgccgcgaagaaggctgccaag
aaggccgaggccgcaccggcgaagaaggctgtcaaggccgccgccaaggcgcctgccaag
aaggccgctgccaagaagaagtga
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