Idiomarina sp. X4: CWC33_00940
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Entry
CWC33_00940 CDS
T05226
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idi03016
]
CWC33_00940
Enzymes [BR:
idi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CWC33_00940
Transfer RNA biogenesis [BR:
idi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CWC33_00940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ATZ72351
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All DBs
Position
166968..168407
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AA seq
479 aa
AA seq
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MSKKLYIKTWGCQMNEYDSAKMADLLKSTHGYDVAEDAEDADLILLNTCSIREKAQEKVF
HQLGRWKNLKQKKPDLLIGVGGCVASQEGDEIRSRAPFVDIIFGPQTLHRLPEMVNQVSE
THAPMVDVSFPEIEKFDRLPEPKADGASAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDD
VIYEIAQLADQGVREVNLLGQNVNAYLGEHFDGTQCRFAELLHLVAAIDGIDRIRYTTSH
PVEFTDDIIEAYTTIPELVSHLHLPVQSGSDRVLTMMKRGHTALEYKSKMRALKKARPDI
ALSSDFIIGFPGESDADFQATMDLIQSVDFDMSFSFIYSARPGTPAADLPDDVSEETKKQ
RLQILQQRLNQQSMAHARRMLDTEQRILVTGPSKKNPMELSGRTENNRVVNFVGQPHMIG
QFVDVRITEVLPNSLRGDLIREEKDMGLRVDTAPETILQRGKVNEPDELGVVKMPPQAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagttatatatcaaaacatggggttgtcagatgaacgagtacgattcagcg
aaaatggctgatctacttaaatcgacacacgggtacgacgttgcagaagatgctgaagac
gctgatctgatcctgttgaacacctgctccattcgcgaaaaggctcaggaaaaggttttc
caccagttaggtcgctggaaaaatctgaagcagaaaaaacctgacttgctcattggcgtt
ggcggctgtgtggcctctcaggaaggcgacgaaattcgctctcgcgccccctttgtcgat
attatatttggaccgcagacgttgcaccgcctaccagagatggtcaaccaagtcagcgaa
acccatgcgccaatggttgatgtgtcgttccctgaaattgaaaagtttgaccgtttgcca
gagcctaaggctgacggtgccagtgctttcgtttcgattatggaaggctgcagtaagtac
tgttctttctgcgttgtcccttacacgcgcggcgaagaagtcagccgccctgttgacgat
gtcatctatgaaattgctcagctggcagatcaaggcgtacgcgaagtgaatttgctcggt
caaaacgtaaatgcctacttaggtgaacactttgatggcactcagtgtcgctttgccgaa
ttacttcacctggttgctgccattgatggcattgaccgtattcgttataccacatcgcac
ccagtcgagtttaccgacgatattatcgaagcctacacaacgattccagagttggtgagt
catctgcacttaccggtacagagcggctctgatcgcgtactgacaatgatgaagcgcggt
catacagcgcttgaatacaagtcaaaaatgcgtgctttaaagaaagcacgtccggacatt
gctctgtcatctgacttcattatcggcttcccgggggagtccgatgctgattttcaagca
actatggatttgatccaaagcgttgattttgacatgagtttcagctttatttatagcgca
cgtccgggaactccggccgccgacttgcctgatgacgtttcagaggaaaccaaaaagcaa
cgcttacaaattttacagcaacgcttaaaccagcaatctatggcgcatgcacgacgtatg
ctggatactgagcaaagaatattagtgacaggaccttcgaaaaagaacccaatggaactg
tctggaagaacagaaaataaccgggttgtaaattttgtcggacaaccccatatgataggt
cagttcgttgatgttcgtattacagaagtgttaccgaacagtcttcgcggcgaccttatc
cgtgaagagaaagacatggggctacgtgtcgacaccgccccagaaacgattttacaaaga
ggcaaagtcaacgaacctgacgagttgggtgttgtaaaaatgcctccacaagcgagttaa
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