Idiomarina sp. X4: CWC33_01000
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Entry
CWC33_01000 CDS
T05226
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00550
Peptidoglycan biosynthesis
idi01100
Metabolic pathways
idi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CWC33_01000 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC33_01000 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
CWC33_01000 (mrdA)
Enzymes [BR:
idi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CWC33_01000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CWC33_01000 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ATZ72363
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Position
178281..180176
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AA seq
631 aa
AA seq
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MRQRTTIRDHEAESAIFARRAMVAIVIVVAVFVLLASNMFHLQVSEHNELQTRSNDNRIK
LVPLAPNRGLIYDRNGVLLAENKPIYSIDVTPEEVPDLDATLTSLQNLLGFPDETLEQFE
QNLKSQRRFNNVPLLDNVNEKELATFAAHQHKFPGVSLEARLIRSYPYADLLTHAVGYVA
KINQQDVNRLKEQGELANYAASRTIGKLGIEKYYEKQLHGTVGYQSVEVNNRGRAVRTLS
IEAPEPGVDVILELDIELQKKAVELLGESRGSIILMNNDTGAILAMASTPSYNPNWFVNG
ISVKQYRSLLNSKDSPLLNRATQGAYPPASTVKPQIALLGLEDGTITKDTRIWDPGWFEI
KGVDRRYRDWLAWGHGWVDVTSAITESCDTFYYDMSLKLGIDKISDFMTKFGFGEITGID
IHEEVPALMPSRGWKRARFGQPWYAGETLSVGIGQSYWTATPIQLTVATSIVANEGKHVI
PRLLRGTLDGGQVSEALITHNRPVEVKKPAHWDVIKDALKKVNMSDTGTARSAFRDAEYS
SAGKTGTAQVRSLGEDEEYNAEEIAERYRDNAMYVGYAPATDPKVTIVVAIENSLGGGGS
VAAPVARKMLDAWHSRYMIKDNQQVKDNADN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcgcacaaccatacgtgatcacgaagccgaatcagctatttttgcccgccgt
gcgatggtcgctatcgttattgttgtggcagtattcgtactgctggcgtccaatatgttc
cacttacaagtgagtgaacataacgaactgcaaacccgttcgaacgacaaccgaattaag
cttgttcctttagcccctaaccgaggactgatttacgatcgtaacggcgttttgttagct
gaaaacaagcctatttacagtattgatgttaccccggaagaagtgcctgacttagacgcc
accctgacatccctccaaaatttgctagggttccccgatgagactcttgagcaatttgaa
caaaacttaaaaagccaacgacgctttaacaatgtgccattactcgacaatgtgaatgaa
aaagaacttgctacattcgcagcgcatcaacataaattccccggggtaagcctggaagcc
cgccttatccgcagttatccctatgcggatttactaacccacgctgtcggctacgttgcc
aaaattaaccaacaggacgtcaatcgccttaaagaacaaggcgaacttgctaattacgca
gccagtcgcaccatcggtaaactaggcattgaaaagtattacgaaaagcagcttcacggc
actgtcggttatcaaagtgttgaagtaaataacagggggcgtgccgttcgcacgctaagc
attgaagcgcctgaacctggagtagacgtgattctcgagcttgatattgaactccagaaa
aaggccgttgagctgcttggggaaagccggggatcaattattcttatgaataacgatacc
ggtgctattcttgctatggcaagtaccccaagctataacccgaactggtttgtgaacggt
atctcagtcaagcagtatcgttcattattgaactctaaagacagcccactgctcaaccgg
gcaactcaaggcgcttacccgcccgcttcaaccgttaagccgcagattgcactcctcggt
cttgaagacggcaccattactaaagacacccgcatatgggaccctggctggttcgaaatt
aaaggcgtagacagacgttaccgagattggcttgcctggggtcatggctgggtcgatgta
accagcgcaattactgaaagctgtgacacgttttactacgacatgtcgcttaaactaggt
atcgataaaatatctgactttatgacaaagtttgggtttggtgaaatcacaggcattgat
atccatgaagaagtacctgcactcatgccatcccgcggctggaaaagggctagatttggt
cagccctggtacgccggtgaaacgttatcggtaggtatcggacaaagttactggacagcg
acgccgattcaactgaccgtcgcaacttctattgtcgcaaacgagggaaaacatgttatc
cctcggctacttcgcggcactttagatggggggcaagtgtcagaagcattaattactcac
aaccgtcccgtagaagttaaaaaaccggcacactgggacgttattaaagacgcactgaag
aaagtgaacatgagtgacaccggcacggcacgttcagcatttagagacgccgaatacagt
tcagccggtaaaacaggtacggcgcaagttcggagcctgggcgaggacgaagagtacaac
gctgaagaaattgcagagcgctaccgcgacaacgctatgtacgtaggctacgcaccggca
actgaccctaaagtcactatcgtcgttgctattgagaattcactcggtggtggtggcagc
gtggcggcacctgttgctcgtaaaatgcttgatgcatggcattcgcgttacatgataaag
gacaaccagcaggtgaaagataatgctgacaactga
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