KEGG   Idiomarina sp. X4: CWC33_01000
Entry
CWC33_01000       CDS       T05226                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
idi  Idiomarina sp. X4
Pathway
idi00550  Peptidoglycan biosynthesis
idi01100  Metabolic pathways
idi01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:idi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CWC33_01000 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    CWC33_01000 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:idi01011]
    CWC33_01000 (mrdA)
Enzymes [BR:idi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CWC33_01000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:idi01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   CWC33_01000 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: ATZ72363
LinkDB
Position
178281..180176
AA seq 631 aa
MRQRTTIRDHEAESAIFARRAMVAIVIVVAVFVLLASNMFHLQVSEHNELQTRSNDNRIK
LVPLAPNRGLIYDRNGVLLAENKPIYSIDVTPEEVPDLDATLTSLQNLLGFPDETLEQFE
QNLKSQRRFNNVPLLDNVNEKELATFAAHQHKFPGVSLEARLIRSYPYADLLTHAVGYVA
KINQQDVNRLKEQGELANYAASRTIGKLGIEKYYEKQLHGTVGYQSVEVNNRGRAVRTLS
IEAPEPGVDVILELDIELQKKAVELLGESRGSIILMNNDTGAILAMASTPSYNPNWFVNG
ISVKQYRSLLNSKDSPLLNRATQGAYPPASTVKPQIALLGLEDGTITKDTRIWDPGWFEI
KGVDRRYRDWLAWGHGWVDVTSAITESCDTFYYDMSLKLGIDKISDFMTKFGFGEITGID
IHEEVPALMPSRGWKRARFGQPWYAGETLSVGIGQSYWTATPIQLTVATSIVANEGKHVI
PRLLRGTLDGGQVSEALITHNRPVEVKKPAHWDVIKDALKKVNMSDTGTARSAFRDAEYS
SAGKTGTAQVRSLGEDEEYNAEEIAERYRDNAMYVGYAPATDPKVTIVVAIENSLGGGGS
VAAPVARKMLDAWHSRYMIKDNQQVKDNADN
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgcgtcagcgcacaaccatacgtgatcacgaagccgaatcagctatttttgcccgccgt
gcgatggtcgctatcgttattgttgtggcagtattcgtactgctggcgtccaatatgttc
cacttacaagtgagtgaacataacgaactgcaaacccgttcgaacgacaaccgaattaag
cttgttcctttagcccctaaccgaggactgatttacgatcgtaacggcgttttgttagct
gaaaacaagcctatttacagtattgatgttaccccggaagaagtgcctgacttagacgcc
accctgacatccctccaaaatttgctagggttccccgatgagactcttgagcaatttgaa
caaaacttaaaaagccaacgacgctttaacaatgtgccattactcgacaatgtgaatgaa
aaagaacttgctacattcgcagcgcatcaacataaattccccggggtaagcctggaagcc
cgccttatccgcagttatccctatgcggatttactaacccacgctgtcggctacgttgcc
aaaattaaccaacaggacgtcaatcgccttaaagaacaaggcgaacttgctaattacgca
gccagtcgcaccatcggtaaactaggcattgaaaagtattacgaaaagcagcttcacggc
actgtcggttatcaaagtgttgaagtaaataacagggggcgtgccgttcgcacgctaagc
attgaagcgcctgaacctggagtagacgtgattctcgagcttgatattgaactccagaaa
aaggccgttgagctgcttggggaaagccggggatcaattattcttatgaataacgatacc
ggtgctattcttgctatggcaagtaccccaagctataacccgaactggtttgtgaacggt
atctcagtcaagcagtatcgttcattattgaactctaaagacagcccactgctcaaccgg
gcaactcaaggcgcttacccgcccgcttcaaccgttaagccgcagattgcactcctcggt
cttgaagacggcaccattactaaagacacccgcatatgggaccctggctggttcgaaatt
aaaggcgtagacagacgttaccgagattggcttgcctggggtcatggctgggtcgatgta
accagcgcaattactgaaagctgtgacacgttttactacgacatgtcgcttaaactaggt
atcgataaaatatctgactttatgacaaagtttgggtttggtgaaatcacaggcattgat
atccatgaagaagtacctgcactcatgccatcccgcggctggaaaagggctagatttggt
cagccctggtacgccggtgaaacgttatcggtaggtatcggacaaagttactggacagcg
acgccgattcaactgaccgtcgcaacttctattgtcgcaaacgagggaaaacatgttatc
cctcggctacttcgcggcactttagatggggggcaagtgtcagaagcattaattactcac
aaccgtcccgtagaagttaaaaaaccggcacactgggacgttattaaagacgcactgaag
aaagtgaacatgagtgacaccggcacggcacgttcagcatttagagacgccgaatacagt
tcagccggtaaaacaggtacggcgcaagttcggagcctgggcgaggacgaagagtacaac
gctgaagaaattgcagagcgctaccgcgacaacgctatgtacgtaggctacgcaccggca
actgaccctaaagtcactatcgtcgttgctattgagaattcactcggtggtggtggcagc
gtggcggcacctgttgctcgtaaaatgcttgatgcatggcattcgcgttacatgataaag
gacaaccagcaggtgaaagataatgctgacaactga

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