Idiomarina sp. X4: CWC33_01065
Help
Entry
CWC33_01065 CDS
T05226
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idi03016
]
CWC33_01065
Enzymes [BR:
idi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWC33_01065
Transfer RNA biogenesis [BR:
idi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWC33_01065
Prokaryotic type
CWC33_01065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
DUF6233
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ATZ72375
LinkDB
All DBs
Position
complement(191461..192423)
Genome browser
AA seq
320 aa
AA seq
DB search
MGKARPRKGRPVCGVVFLDKPKGMSSNHALQRVKRLYNAQKAGHTGALDPLATGLLPVCL
GEATKFSQYLLDADKSYRVEATLGVRTTTSDAEGEEVERKAVNITEDDIRRKLPRFIGPQ
QQTPSIYSALKHEGRPLYYYARRGIDVPQKVREITIHSIEFIQLVGEVLELQVSCSKGTY
IRTLIDDLGQALGCGAHVSLLHRNGVADLNADNMLTIEQLEQLAEAGDLDAQLHSVDCLL
HALPEQKVTRSEARDLLHGQPVDNCLDREVAVGDQCRMWCERHDGGKEFIGVGALRDDNR
FWPKRVLALEFCEFSLDDLK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagctcgtccccgcaaagggcgtcctgtctgtggcgtagtctttctggataaa
ccgaagggcatgagttccaatcatgcccttcaacgtgttaaacgcctatacaacgctcaa
aaagccggtcataccggcgctctggatcctttagcaaccggcttattgcccgtgtgttta
ggggaggccactaaattttctcaatacctgcttgatgcggataaaagttatcgggttgaa
gccactttgggtgtgcgtacaacgacgagtgacgcagagggcgaggaagtagagcgtaag
gcagtcaatattaccgaagacgatattcggagaaaactgccgcggtttattgggccgcaa
caacaaactccgtctatctattccgcgcttaagcacgaaggtcgaccattgtattattac
gctcgccgcggtattgacgtcccacaaaaagtgcgtgagataaccatccactccattgag
tttattcagttagttggtgaggttcttgagttacaggtcagctgcagcaaagggacttat
atacgcacattaatcgatgacctgggtcaggcattagggtgtggagcgcatgtttcgtta
cttcatagaaatggtgtggcggacttaaacgcggataatatgttgactatagaacagctg
gagcaattagctgaagcgggcgatctggacgcgcagctgcattcggttgactgtctgcta
catgccttacccgagcaaaaagtcactcgttctgaagcacgagatttacttcatgggcag
ccggtagataattgcttagaccgtgaggttgctgttggcgatcaatgtcgtatgtggtgt
gagcgccatgatggtggaaaggagtttattggtgtcggagctctgagggatgataatcgt
ttttggcccaaaagagtcttggcgcttgaattctgtgagttctctctcgatgatttgaaa
taa
DBGET
integrated database retrieval system
