Idiomarina sp. X4: CWC33_01205
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Entry
CWC33_01205 CDS
T05226
Name
(GenBank) signal protein
Organism
idi
Idiomarina sp. X4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_3
PAS
PAS_4
Y_Y_Y
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ATZ72401
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Position
223209..227060
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AA seq
1283 aa
AA seq
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MTLPTKVWKCTYACFLLLFTGLAYSETDVPPLLQVQNGHFITTADGLPSNYVDDVANGPQ
GFLWASTAKDLVRYDGEQFTSVNDINFIEKPSSARLLGTKDRLWAADKDRLWILSSNHSW
ASFALPNHNQRTVQLNHISSAKNNRLLLATTENLIIFDAQTHSFKEQPLRYSGQPITGIR
FISFHNDWFWLSTVAGGIYVWDGSSENVFSITKSNPITDKLDAKNLYALTSFNDNLWLAT
DNGIKVLNDELRKAPTPEAIEKLNEVIVDIKVHDKQLFVATEKAIYTLNYGALKQLTTDG
ITGKLTFNVNGDLYIATASNGLYEIPTNYAPAILKSFTRPNKLSGNTQSYLPGSLKQAST
FSRVNNHNYWVESDLGIVHYDFAKEEIIEIVNPPNQEQIKDIEAYSDNVYLLTLSHQLYR
YNTVTQTWLPMPLNYSPTDNFWLTRLGDTLWLHSDKAAFPINDFSEIGSKQTINNAPSLF
YSSLAIDTKQMNKALNTWFSIPFFSPVEELIYRYRLDSDSDKWAYLTHSELPLRLEQSIP
GTYQLTVQASIDGENWSAESQTSYRISHSFWSTPYAYISYLAISFLLLVIVIALYRHKLK
RINTVIASLDGQAKALRFSRSQYWQWDLSTGELLRQHIWPQCPAFPVDGRRLKSPQSTSS
NIHPSDVLRMQSALDKHLNGDSEYYECSYRINNNGNWLWVLDQGCLERTNGSAVMHGTLS
DVSSLVSSQDRIDMLAASITNISDGICIFDRFFKKVEVNKAFERILGYPREQVLSKSFHL
DLYSEEFTNQIKRTVIKEGTWRGELSDLKADGSEFLMELTLDAVHDDEGDLSFIVASFSD
VTERQRTESELRRLSNTDTLTGLPNRSYFQVSHSNLVRKKVSHTLLLFDLDDFKKINDSL
GHEVGDDLLCLVAERLMDISRRQDTLYRLGGDEFGLLIEDSTDLHLIGDLAHKINRTIAE
PYSVNNHDIVIGSSIGIVLFPHDGITSQELLQKADMAMYHAKQRGGNCYQFFSQSMNENA
VQRLKLENQLRVALKNNGVEVYYQPKIEVHTGHISGIEALARIKSEDGSQISPADFIPLA
EETGLIIELGEQVLRQSCQAMKTFMQYAGSPKTIAINLSARQFMQSGLALQIESILREES
LQPRHVEFEITEGMVMSDPERAIIMMENLSDMGVKLALDDFGTGYSSLAYLKRFPMDSLK
IDKAFIDDITTSPKDRSMVASIIGMAHNLGLKVIAEGVESEAQLEQLKSLECEYIQGFYY
AKPMPADDFIEFIKQHTADVIDV
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgactttgccaacaaaggtgtggaagtgcacctacgcatgctttttacttttgtttacc
ggcttagcctattccgagaccgatgttccaccactccttcaggtacagaatgggcatttc
attacgacggctgacggcttacctagtaactatgtggacgatgtagcgaacggtcctcaa
ggctttctttgggcatcaacagcgaaagatcttgttcgatacgatggcgagcagtttact
tcagttaacgatattaatttcatagaaaagccttcctcagctcggttgttgggcactaaa
gatcgactatgggctgcagacaaggatcgcttgtggatactatcatccaatcactcatgg
gcgtcatttgccttgcccaaccacaaccagagaacggtacagctgaaccatattagttcc
gcgaagaacaaccgactgcttttagcaacaacggaaaacctgattattttcgacgcacaa
actcactccttcaaagagcagcctctcagatacagcggtcaacccattacaggtatccgt
tttatcagttttcataacgattggttctggttaagcacggtggcaggcgggatctacgtt
tgggatggctcgtccgaaaatgtattttcaattacaaagagcaacccgattacagacaaa
ctagacgcaaagaatctatacgccttgacgtcttttaacgataatctttggcttgccaca
gataatggcatcaaagtactcaatgatgaattacgaaaagcgcctacgcctgaagcgata
gaaaaactcaacgaagttattgttgatataaaggttcacgataagcagttatttgttgca
accgaaaaagccatttacacgttgaattacggagcattaaagcaactaactactgacggc
attacgggcaagttaacattcaatgttaacggcgatttatacattgcaaccgcgtctaac
ggactttatgaaattccgacaaactatgcgccggccatcctgaaaagttttacgaggccc
aataaactgagcggaaatactcaatcttacttacccggctcgctcaaacaagcaagcact
ttcagtcgagtgaacaatcacaattattgggtcgaatccgacttaggcattgtccactat
gatttcgccaaagaagaaatcatcgaaatcgtaaatcccccaaaccaagaacaaataaaa
gacatagaagcctactcagacaatgtttatttactcacattaagtcatcaactgtatcgg
tataacactgtcacccagacctggctgccaatgcccctaaattattctccaacggataat
ttttggcttacacgtctaggcgatacactttggcttcattctgacaaagcagcgttccca
ataaatgacttttcagaaattggctcaaaacaaacaataaataatgcaccatcattgttt
tattcatcgctcgctattgatacaaaacaaatgaataaggcgctcaacacctggttttcc
attccattctttagtccagtggaagaactcatttatcgctacagactcgacagtgactcc
gacaaatgggcttatctgactcattctgagctaccgctgcgtcttgaacaatcaataccc
ggcacctatcagttaaccgttcaggcctctattgatggcgaaaattggtctgctgaaagc
caaacaagttatcgcatttctcattcattctggagtacgccgtacgcttatattagttac
ctagccattagttttttgctactggtcatagtgatagccttgtaccgccataaattgaaa
cgtatcaataccgtcattgcctctctcgacggacaggcaaaagcgttacggtttagccgc
agtcaatattggcaatgggatttatcgacaggtgaacttttaaggcagcatatctggcca
cagtgcccagcttttcctgtcgacggccgccgcttgaagtccccacaaagtacctcgtca
aacatccatcccagcgatgttcttcgcatgcagtccgcactggacaagcatttgaacggc
gactctgagtattatgagtgttcttaccgtatcaacaacaatggcaactggctttgggtg
cttgatcaaggctgtctcgagcgtaccaatggctctgcagtgatgcacggtacattgagt
gacgtaagtagtctcgttagctcacaagaccgaattgatatgctggcagcgtccatcacc
aatatttctgacggtatttgtattttcgatcgcttcttcaagaaagtagaggtcaacaaa
gcctttgagcgcatactggggtacccgcgggaacaggttttgagtaaaagttttcacctc
gacttatactctgaagaatttaccaaccagattaagcgtacagtcatcaaagaaggtacc
tggcgtggtgagttaagcgacctaaaagctgacggcagtgagtttttaatggagttaacc
ttagacgcggtccatgatgatgaaggcgacttatctttcatcgttgccagcttctctgat
gttactgagcgccagcgcacggaaagcgagcttcgccgcttatcaaatactgacacctta
accggtttgcctaaccgctcatactttcaggtaagtcactcgaacttagtgcgtaaaaaa
gtctctcacaccctgctgttgtttgacttagatgactttaaaaagataaacgactcgctg
gggcatgaagttggtgatgatttgctctgcctggttgctgagcggcttatggatattagt
cgacggcaggatacactttaccgactgggtggtgatgagttcgggttattgatcgaagac
agtactgacttgcatcttatcggtgacttagcgcacaaaattaaccgcaccattgcagag
ccctattctgttaacaatcacgatattgttattggcagttccattggtattgtcctgttt
ccacatgacggcattacctcacaagaacttcttcaaaaagccgatatggcgatgtatcac
gccaaacagcgcggcggaaattgctatcagtttttcagccagtcgatgaatgagaacgcc
gtgcagcgactgaagctggaaaaccaactgcgcgtcgctttgaaaaataatggcgttgaa
gtttactatcaaccaaagattgaggttcatactggacacatatccggtatagaagcgctg
gcaagaataaaaagtgaggacggctctcagataagcccggctgacttcattcctttggcg
gaggaaacgggcttgattattgagcttggggaacaagttttacgtcaatcatgccaagcg
atgaaaaccttcatgcagtatgctgggtcgccaaaaaccattgcaattaacctgtcggct
cgccagtttatgcaatctggtctggcattgcagatagagagtatattgcgtgaagagtcc
ctacagccgcgccatgttgagtttgaaataaccgaaggcatggtcatgagcgaccctgaa
cgcgcgattattatgatggagaacctgtctgatatgggagttaagctggcccttgatgat
tttggaacgggctattcgtcacttgcttaccttaagcggttcccgatggacagcttaaag
atagacaaagcctttattgatgacataaccaccagcccgaaagaccgcagcatggtagcc
tcaattattggtatggctcataatctcggtctgaaagtgattgccgaaggagttgaatct
gaagctcagctggagcaattaaaaagccttgaatgcgaatacatccaaggcttttattat
gcgaaaccaatgcctgctgacgactttattgagtttatcaaacagcacacagcagacgtg
attgacgtttaa
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