Idiomarina sp. X4: CWC33_01255
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Entry
CWC33_01255 CDS
T05226
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idi03032
]
CWC33_01255
03036 Chromosome and associated proteins [BR:
idi03036
]
CWC33_01255
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_01255
DNA replication proteins [BR:
idi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CWC33_01255
Chromosome and associated proteins [BR:
idi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CWC33_01255
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CWC33_01255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
NolB
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ATZ72411
LinkDB
All DBs
Position
complement(239719..239991)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDSMIDAVTDALKKDDQVALVGFGTFSVRERSARTG
RNPQTGETIQIAAAKVPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcagcttattgacaaaatcgcggcaggtgcagatatttctaaggctgct
gctggtcgtgctctggactcaatgatcgatgcagtaactgatgctctgaaaaaagatgac
caagtcgcattagttggcttcggtacatttagtgtacgtgagcgttctgctcgcactggt
cgtaacccacaaactggtgagaccattcagatcgctgcagctaaagtaccttctttcaaa
gcaggtaaagcactgaaagacgcagtaaactaa
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