KEGG   Idiomarina sp. X4: CWC33_01255
Entry
CWC33_01255       CDS       T05226                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
idi  Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:idi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:idi03032]
    CWC33_01255
   03036 Chromosome and associated proteins [BR:idi03036]
    CWC33_01255
   03400 DNA repair and recombination proteins [BR:idi03400]
    CWC33_01255
DNA replication proteins [BR:idi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CWC33_01255
Chromosome and associated proteins [BR:idi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CWC33_01255
DNA repair and recombination proteins [BR:idi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CWC33_01255
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 NolB HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ATZ72411
LinkDB
Position
complement(239719..239991)
AA seq 90 aa
MNKSQLIDKIAAGADISKAAAGRALDSMIDAVTDALKKDDQVALVGFGTFSVRERSARTG
RNPQTGETIQIAAAKVPSFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtctcagcttattgacaaaatcgcggcaggtgcagatatttctaaggctgct
gctggtcgtgctctggactcaatgatcgatgcagtaactgatgctctgaaaaaagatgac
caagtcgcattagttggcttcggtacatttagtgtacgtgagcgttctgctcgcactggt
cgtaacccacaaactggtgagaccattcagatcgctgcagctaaagtaccttctttcaaa
gcaggtaaagcactgaaagacgcagtaaactaa

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