Idiomarina sp. X4: CWC33_02140
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Entry
CWC33_02140 CDS
T05226
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03030
DNA replication
idi03430
Mismatch repair
idi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC33_02140
03430 Mismatch repair
CWC33_02140
03440 Homologous recombination
CWC33_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idi03032
]
CWC33_02140
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_02140
Enzymes [BR:
idi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC33_02140
DNA replication proteins [BR:
idi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC33_02140
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC33_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ATZ72564
LinkDB
All DBs
Position
complement(425456..426097)
Genome browser
AA seq
213 aa
AA seq
DB search
MANWLQQLANWYDRRQQLKQPWQQLRYVALDIESTGLSPTKHDILSIAWVSIQPPAIQLG
NAQYHVFSHGQEIDLGQSPTIHGLTKDDFVHSSDPKQTFSMLSRALNDAVMVCHHKGMDW
GFLKQVEKAYGIPMKPLAVFDTLAFEKKRLEKAEGAVRKDSLTLSACRKRYGLPDYHSHH
ALTDAIACGELFLAQGYSTNTSLNSMNDFKASL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggccaattggttacaacaacttgcaaactggtatgaccgtcggcagcaattgaaacag
ccctggcagcagcttcggtatgttgctttggacattgaaagtacgggcttaagcccaact
aagcatgacatattgtcaattgcctgggtcagtatacaaccaccggcgatacaactcggt
aatgcacagtaccacgttttttcgcatgggcaggaaatagatttagggcagagcccaacc
attcatggattaaccaaagacgatttcgtacatagctcagacccaaagcaaactttttca
atgctgagtcgtgcgctcaatgatgcggtaatggtttgtcatcacaagggaatggactgg
ggttttttgaagcaagtcgaaaaagcgtatggcattcctatgaaaccgcttgctgtattt
gacacgttagcttttgagaaaaagcggcttgagaaggcggaaggggctgtccgaaaagac
tctcttacgttgtcagcatgccgtaagcgatacggactacctgactatcactcacatcat
gcacttaccgatgcaattgcatgtggtgagttgtttttggcgcagggatattcaactaat
acgtctttaaatagtatgaatgactttaaagcctctttataa
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