Idiomarina sp. X4: CWC33_02980
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Entry
CWC33_02980 CDS
T05226
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00521
Streptomycin biosynthesis
idi00523
Polyketide sugar unit biosynthesis
idi00525
Acarbose and validamycin biosynthesis
idi00541
Biosynthesis of various nucleotide sugars
idi01100
Metabolic pathways
idi01110
Biosynthesis of secondary metabolites
idi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWC33_02980 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWC33_02980 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CWC33_02980 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWC33_02980 (rfbB)
00525 Acarbose and validamycin biosynthesis
CWC33_02980 (rfbB)
Enzymes [BR:
idi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CWC33_02980 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
NmrA
DapB_N
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ATZ74524
LinkDB
All DBs
Position
complement(619171..620274)
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AA seq
367 aa
AA seq
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MNKMNPMKILVTGGAGFIGSAVIRHLINDTNHSVVNVDKLTYAGNLESLASVNNNNRYAF
EQVDICDANEIKRVFEQHQPDVVMHLAAESHVDRSIDGPGEFMHTNIIGTYTLLEQARAY
WQNLPENQKANFKFHHISTDEVYGDLPHPDTHAGELPLFTETNAYKPSSPYSASKASSDH
LVRAWHRTYGLPTVITNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGRGNQIRDWLYV
EDHARALVKVAFEGKVGETYNIGGHNEKQNIEVVGTICDILDELVPNNSTYKELITYVED
RPGHDMRYAIDSTKIKKDLGWIPEETFESGIRKTVQWYLNNEEWCQRVQDGSYQRERLGS
AQSGDVA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgaaccccatgaaaatattagtcacaggcggtgcaggcttcataggctca
gccgttatccgccacttaatcaatgacactaaccacagcgtagtcaacgtcgacaaactc
acctacgcaggcaacttagaaagcctggcatcagtcaacaacaataaccgttatgcattt
gagcaagtcgatatatgcgacgctaacgaaataaagcgagtattcgagcagcatcagcca
gatgtcgtcatgcacttagcggcagagtctcacgtggaccgctccattgacggccccggt
gagttcatgcacactaacattattggtacttatacgcttctagagcaggcaagagcctac
tggcaaaacttgccagagaatcaaaaggctaacttcaagtttcaccatatatcgacagat
gaagtctacggcgatttaccccatccggatacgcatgcaggtgaactaccactattcaca
gaaactaatgcttacaagccgagctctccatacagtgcatcaaaagccagtagcgatcac
ttagtcagagcctggcatcgtacctacggtttacctactgtgattactaactgttccaac
aattatggaccttaccattttcccgaaaaactgattccgctcatgattttaaatgcttta
gacggtaagccattacctgtttatggtagagggaaccagatacgagattggctgtatgtg
gaagatcacgctcgagcactggtgaaagtggcattcgaaggtaaagtcggcgaaacctac
aacattggtgggcataacgaaaagcaaaacattgaagtggtgggtactatttgcgacata
ctcgatgagctagtaccgaataacagcacgtataaagagctaataacctatgttgaagac
cgccctggccatgacatgcgctacgccattgactcaaccaaaattaagaaggacttaggc
tggatacctgaagaaacattcgagtctggtatacgtaaaacagtgcagtggtatttaaac
aacgaggaatggtgccagcgagtgcaggacggtagctaccaacgagagcgtttaggaagt
gcacagtcaggagacgtagcatga
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