Idiomarina sp. X4: CWC33_03525
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Entry
CWC33_03525 CDS
T05226
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00470
D-Amino acid metabolism
idi00550
Peptidoglycan biosynthesis
idi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CWC33_03525 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CWC33_03525 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
CWC33_03525 (murD)
Enzymes [BR:
idi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CWC33_03525 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
Precursor biosynthesis
Amino acid ligase
CWC33_03525 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ATZ72819
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All DBs
Position
complement(742086..743462)
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AA seq
458 aa
AA seq
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MTTINWQKIKHIVVLGLGKTGVSVVRFLANKPSLIADVRVFDSRENPPGLEDAKAIMPRA
EFNTRHWEIEDTLAADLIITSPGIDSREEPLTLARDAGIPVVGDIEIFAQNVDFPLVAVT
GSNGKSTVTRLVEFIGQLAGKNVVAAGNIGLPVLDLLQLDSKPDAVVLELSSFQLELTEK
LRLKAAALLNISADHLDRYNALEDYIAAKQRIFNNADTWVLNRQQQDTWPHPITGKVLSI
GKDAHPNDFGLLGGNVDKSSGPVAITYAGEVVLRADQLQLQGVHNLLNAQAALGLALSLG
ISIEDAVEAAKNFDGLAHRCQLVSQESGVLWVNDSKATNIGATAAAVEGLRPAITGRLLL
IAGGDGKGADFKELTGTLDKVDILLTIGKDGPKIGQLFNGSRQVNDLVQAVELAKSLVQP
GDMVLLSPACASFDQFDNFEHRGDVFCQAVEAANGNRA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgataaactggcagaaaataaaacacattgtggtactcggtcttggtaagacg
ggtgtctcagttgtgcgttttcttgccaataagccatcgttgattgcggatgtacgagtg
tttgactcacgcgaaaatccgcccggcctggaagatgcgaaagcgataatgccacgcgct
gaattcaacacgcgacactgggaaattgaagacaccctggccgcagatttaataattacc
agccctggcattgactctcgagaagagccgttaacgttagctcgagatgcgggtattccg
gtcgttggtgatatcgaaatctttgctcaaaatgtcgatttccctctggttgctgtaacc
ggctcaaatggtaagtcgaccgtgacccgattggttgagtttattggtcagctagccggg
aaaaacgtagttgcagccggaaacattgggttaccggtgttagacctgctgcagcttgat
agcaaacctgacgctgttgtacttgagttatcgagtttccagctggagctaactgaaaaa
ttaagactaaaagcggcggcgttgctgaatattagtgccgatcaccttgatcgttataat
gcgcttgaagactatattgccgctaaacaacgcatatttaataacgcggatacctgggta
ctgaatcgtcaacagcaggatacctggcctcaccccatcacggggaaagtattgagcatt
ggcaaagatgcgcatccaaacgattttggtttgctgggaggcaatgtcgataaatcgagc
ggtcccgttgctattacctatgcaggagaagtggttttaagggcagaccagcttcagtta
caaggcgtccataatttattaaacgcacaagctgcactgggtctggcattgtcgcttggt
atctctatagaggacgccgtagaagcggcgaaaaattttgacgggttagcgcaccgctgt
cagttagtcagtcaggagtcgggtgtgctttgggttaatgattcaaaagctaccaatatt
ggtgcaaccgctgcagcagtggaaggcctgcgtcccgcaattaccggacggcttttattg
attgctggtggagatggcaaaggtgcggattttaaagaattaaccggcacgttagacaaa
gtcgacatactgctaaccatcggtaaagatggtccgaaaatcggtcagctgtttaatggg
tcgaggcaggttaacgatcttgtgcaggcggtagagcttgctaaatcactggtacaaccc
ggagacatggtactgctatcgccagcgtgtgcaagttttgatcagtttgataacttcgag
catcgtggtgacgtattctgtcaagcggtggaggcagcgaatggcaaccgtgcgtga
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