Idiomarina sp. X4: CWC33_05520
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Entry
CWC33_05520 CDS
T05226
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idi03016
]
CWC33_05520
Transfer RNA biogenesis [BR:
idi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CWC33_05520
Prokaryotic type
Methyltransferases
CWC33_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
Arf
ABC_tran
AAA_28
Roc
SRPRB
AAA_29
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
ATZ74550
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Position
1148456..1149829
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AA seq
457 aa
AA seq
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MDDTFSDDTIVAQATPPGRGGVGIVRVSGSAATQVAEQLLGHCPKPRKAEYLPFYDSNNE
LLDEGIALFFKGPNSFTGEDVLELQGHGGPVLIDMIIKAILEMPGIRPARPGEFSERAFM
NDKLDLTQAEAIADLIDTNSEQAAKAALQSLKGEFSHRVDQLVDAVIHLRMYVEAAIDFP
DEEIDFLSDGKVATDLADIIDQLFHIEQEAKQGTLMREGMRIVIAGRPNAGKSSLLNALA
GRESAIVTEIAGTTRDVLREHIQIDGMPLHIIDTAGLRESPDQVEQIGIERAWDEIRQAD
RVLFMVDSQETSAIHPDDIWSEFFAQLPDDMPYTVIRNKVDLSEEPTGIDEHNGIPVVHL
SAKTGHGIELLREHLKHCVGYNATSEGSFMARRRHLDALAKAKTHLLQGQEQLEANMAGE
ILAEELRLTQQHLNEITGEFTSDDLLGQIFGSFCIGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacctttagcgatgacaccatagtcgctcaagcgacaccacccggtcgcggt
ggtgttggtattgtccgtgttagcggttcggctgccacccaggtcgccgaacagctatta
ggccactgcccaaaacctcgtaaagcagaataccttcccttttatgacagtaacaacgag
ttactggacgagggtatagcgctgtttttcaaaggtcctaactcctttaccggtgaagat
gtattagaacttcagggacacggcggcccagtattaatcgacatgatcataaaagccata
ctggaaatgccgggtatacgtcctgcacgcccaggcgaattcagcgaacgcgcttttatg
aacgacaaactcgatttaacgcaggcagaagccatcgccgaccttatcgataccaactcg
gaacaagccgcaaaagctgcattacaaagtttaaaaggcgaattctctcaccgggttgat
caactcgttgatgccgttattcatctacgcatgtacgttgaagcggctatcgactttccc
gacgaagaaattgactttttaagtgacggtaaagtcgcaaccgatttggcggacattatc
gaccaactgttccatatagaacaggaagctaagcaaggcacactcatgcgtgagggtatg
cgtattgtgattgcgggtcgccccaatgccggtaaatcgagcttacttaacgcactcgcc
ggacgagagtcggccattgtcacagaaattgcaggcaccactcgcgacgtattacgtgaa
cacattcaaatagacggcatgccgttacacattattgataccgcgggtttacgcgaaagc
ccggatcaagttgagcagataggcattgagcgagcctgggacgaaattcgccaggctgac
cgggtactctttatggtcgatagtcaggaaacctcggcgatacacccagacgatatttgg
tcggaatttttcgctcaactacccgatgacatgccttacaccgttattcgtaacaaagtt
gacttgtcagaagagccaacgggaatcgatgaacataacggcattcctgtcgttcatttg
tctgcgaaaacaggccacggtatagagttattgcgtgaacacctgaagcattgtgttggc
tataatgcgacctcagaaggcagctttatggcccgccgtcgccacttagatgcgcttgcc
aaagcgaaaacgcatttgctacaaggtcaggagcaacttgaagccaatatggccggtgaa
atactcgcagaagagctacgtttaacacagcaacacctgaacgaaataaccggtgaattc
acttctgatgacctattgggccaaattttcggatcgttctgcatcggcaaataa
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