Idiomarina sp. X4: CWC33_05680
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Entry
CWC33_05680 CDS
T05226
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
idi
Idiomarina sp. X4
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
HTH_23
HTH_29
AAA_2
AAA_16
HTH_28
HTH_17
AAA_19
AAA
AAA_3
AAA_22
AAA_30
Xre-like-HTH
TIP49
PhyR_sigma-like
MerR
HTH_Tnp_ISL3
nSTAND3
MCM
HTH_7
HTH_Tnp_1_2
AAA_29
RsmI_C
PIF1
HTH_Tnp_IS630
Motif
Other DBs
NCBI-ProteinID:
ATZ73220
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Position
1179482..1180822
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AA seq
446 aa
AA seq
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MAVLKAVIGVVEDDPALQELLVEELEAEGYQVSAWGSLEEFQCSKASPDLIVSDIRLPGK
SGLTLLESLKQQDNPPALLLITAFGTVDQAVDALKKGADDFLTKPLDIEHLLLSVDRILE
HRSLQRELKRYKQQQKGPGGLVGQSPAMRKLYDQIEHIAPTGGSVLITGESGTGKELVAK
ALHELSDRADKPFQAVNCAGIPADLMESEFFGHAAGAFTGAQNKRQGLLKQADGGTLLLD
EIGEMPMALQAKLLRVLQEGTIRAVGSDKEEQVNVRILAATHQDLERLVEEGKFRQDLFY
RLETFSLRVPPLRERGEDIERLANFFLQQQQESSDKTVRGISAEALDLLYRYPFPGNVRE
LQNAIERAFAFSSDDTLSVDDFPQRIVEKSDTSQPAATSAWPTLDEYQSQYIRKVLEHTD
GNKSQAAQILGVTRRTLYRWLDNASE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacttaaagctgtcattggtgtggttgaagatgacccagctttgcaggagctt
ttggtcgaagagcttgaagcggaaggctaccaggtgagcgcctggggaagcttagaagag
tttcaatgcagcaaggcaagtcccgatttaattgtcagcgacatacgactgccgggaaag
tcagggctcactttgctggaaagcttaaaacagcaggataacccaccggcactgctgctg
ataacagcatttggtacagttgaccaggcggtggatgcgctgaaaaaaggtgccgatgac
tttctgactaaaccgctggatatcgagcacctactgttgagcgttgatcggatattagag
catcgttcattgcagcgggagctgaaacgttacaaacagcagcagaaaggtcccggtggc
ctggtaggacaaagccccgccatgcgtaagctttatgaccaaatagagcacattgcgcca
acgggtggcagtgtccttattaccggtgaaagtggcactggtaaggagctagtcgctaaa
gccctgcatgaactgagcgacagagctgacaaaccgtttcaggccgttaactgtgcgggc
attcctgctgacttaatggaaagtgagttctttggccatgctgcaggcgcttttaccggc
gcacagaataaacgtcagggtcttttaaaacaagctgatggcggcaccttattgcttgat
gaaattggcgaaatgccgatggcgctccaggccaaattattgcgtgtattacaagaaggt
actataagagctgttggtagcgataaagaagagcaagtgaacgttcgcattcttgctgcg
acgcaccaggacttagagcgtttggttgaagagggtaagttccggcaggatttattttat
cgtctggaaacgttcagcttgcgcgttcctcctttgcgtgagcgaggtgaagatattgag
cggctggcgaacttttttcttcagcaacaacaagagagtagcgataaaacggtacgcgga
atttcggcggaggctctcgatttattgtatcggtatccgtttccgggcaatgttcgggaa
cttcaaaacgccatagagcgggcatttgcgttttccagtgacgacaccttgtcagttgat
gactttccgcagcgtatcgttgaaaaaagtgataccagtcagccagcggcaacctctgcc
tggccaacgttggatgaataccaaagccaatatattagaaaagtgttagagcataccgat
ggcaataagtcgcaggcggcacagatattaggggtgactcggcgcacgttatatcgatgg
cttgataacgcctcggaatga
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