Idiomarina sp. X4: CWC33_05820
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Entry
CWC33_05820 CDS
T05226
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00300
Lysine biosynthesis
idi00470
D-Amino acid metabolism
idi01100
Metabolic pathways
idi01110
Biosynthesis of secondary metabolites
idi01120
Microbial metabolism in diverse environments
idi01230
Biosynthesis of amino acids
Module
idi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CWC33_05820 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CWC33_05820 (lysA)
Enzymes [BR:
idi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CWC33_05820 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RsmF-B_ferredox
CutC
Motif
Other DBs
NCBI-ProteinID:
ATZ73242
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Position
1212475..1213737
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AA seq
420 aa
AA seq
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MSESISYKNNQLHVEDISCQRLVERFGSPLYVYSKAQLVSNWQQFQQHWPNPHKLCYAVK
ANSNLAVLQVLAHQGAGFDIVSGGELLRVLAAGGKPESIVFSGVAKSKDEIILALETGIG
CFNVESEAELERIQDIAAAMSKQAPVSLRVNPDVDAKTHPYISTGMKANKFGIGMKQSRA
VFKKAAELPNIRLIGADCHIGSQIMTPEPFLDAAKLMFELVLDLKKEGIELTHLDLGGGF
GVSYQNEAPLDKSRYLNQLVEMAKDFPDVTMMLEPGRAIAANAGVLLTSVEYIKASEEKR
FVLVDAGMNDMLRPSLYQAWHDIVPVKEKNDEAPQISDIVGPVCETGDFLGHARHLNVVQ
DDILAVKHAGAYGFTMASNYNSRGRPAEVMVSGSDARLVRERENFDDLIRGEHLLDKDYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtccatttcttataaaaataatcaacttcatgttgaggatatcagttgtcaa
cgtttggtggagcggtttggttcgccactgtatgtgtattcaaaagctcagttggtatcg
aactggcaacagtttcagcagcactggccgaatccacacaagctatgctacgccgtaaaa
gccaatagcaacctcgcggttttgcaggtgctggctcatcagggcgcgggttttgatatc
gtttccggcggtgagttactgcgtgtgcttgcggctggcggcaagccagaaagcattgtt
ttctccggcgttgccaagtcaaaagatgaaattattttagcgctggaaaccggtatcggc
tgttttaatgtggaatcggaagccgagcttgagcgtattcaggatattgccgcggcaatg
agtaagcaggcgccggtgtcgctcagagtgaacccggatgttgacgcaaaaacacatccg
tacatttcaaccggaatgaaagccaataaattcggtatcggtatgaaacagtcccgagcc
gtatttaagaaggccgcggagttacctaatattcggctgattggagctgattgtcatatt
ggctcacaaattatgacgcccgaaccgtttttagatgccgccaagctaatgtttgagtta
gtgctggatctgaaaaaagagggcattgagctaacccaccttgatttaggcggtggtttt
ggtgtgtcgtaccaaaacgaagcacctttggataaatcgcgctacctgaaccaactggtt
gagatggcaaaggattttccggatgtgacgatgatgcttgagcctggccgggcgatagcc
gcaaacgcgggtgtattactgacgtcggtggaatacattaaagcatcagaggaaaagcgg
tttgtgttagtcgatgcgggcatgaacgatatgttgagaccctcgttgtaccaagcttgg
catgacatcgttcccgttaaagagaaaaacgatgaagcaccgcaaattagcgatattgtc
gggcctgtttgcgaaaccggtgactttcttgggcatgcgcggcatttgaatgtcgttcag
gatgatattcttgcggtaaaacacgccggcgcttatggtttcacaatggcgtcaaactat
aattcgcgcgggcgaccggcagaagtcatggtttccggaagtgatgcacgtttggtcaga
gaacgtgaaaactttgacgatcttattcgtggcgagcatttgctagataaggattacatc
taa
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