Idiomarina sp. X4: CWC33_05845
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Entry
CWC33_05845 CDS
T05226
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03420
Nucleotide excision repair
idi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWC33_05845
03430 Mismatch repair
CWC33_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_05845
Enzymes [BR:
idi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWC33_05845
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWC33_05845
MMR (mismatch excision repair)
Other MMR factors
CWC33_05845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF4391
AAA_11
ResIII
DUF3553
CG7065_bundle
Motif
Other DBs
NCBI-ProteinID:
ATZ73247
LinkDB
All DBs
Position
1216964..1219135
Genome browser
AA seq
723 aa
AA seq
DB search
MSTHPLLAELNERQQQAVSAPDGHMLVLAGAGSGKTRVLVHRIAWLIQQQNYSPFSILAV
TFTNKAAAEMRGRVEQLVGSSVRGMWIGTFHGLAHRLLRAHYMDVGLPQNFQILDSDDQQ
RLIKRLIKSLNLDDKRWPAKQAQWYINGKKDEGLRAEHIETYDPTEQTLKEIYQLYQESC
DRAGLVDFAELLLRAHELLRNNRIVREHYQNRFRHILVDEFQDTNSIQYAWVRLLAGAQN
SVTIVGDDDQSIYGWRGAKVENIHQFLEDFAGAQTIRLEQNYRSTSTILKAANSVISNNS
GRLGKDLWTEGNEGEPISLYAGFNEMDEARYIVSQIEGWRDKGNSLQDVAILYRSNAQSR
ILEEALLHARLPYRIYGGLRFFERQEIKDALAYLRILGNRDDDAALERVINTPARGIGGR
TMDIIRQASRERAESLWNAAKYMVNEKQLAGRARNAVGSFLDFIEELDDETEEFSLGRLS
DEVIKKSGLMAMYEAEKGEKAETRVENLKELVTACENFVLDDAEEDMTPLNAFLAHAALE
AGEEQADEYQDAVQLMTLHSAKGLEFPLVFMTGVEEGMFPSQQSMDEPGRLEEERRLCYV
GMTRAMEKLVLTYAEQRRIYGQELFHRISRFIAEIPPDTLHEVRAQTSVEKPSSYSRFNN
AASHEAFDQTGYTLGQRVRHPKFGEGTVLNYEGTGPQSRVQINFDNVGSKWLVVAYARLD
PVF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacaccctcttctggcagaattgaatgaaaggcagcagcaagcagtatcggca
cccgacggacatatgttggtgctggctggcgccggaagtggtaaaacaagggtgttagtg
caccgtattgcctggctcattcaacagcaaaactattctccgttcagcattctggcggtc
acttttaccaacaaagcggcggcggaaatgcgtggccgtgttgagcaactagtcggcagt
tctgtgcgaggcatgtggattggtaccttccatggattagcgcataggttgttacgagcg
cattatatggatgtcgggctgccacagaattttcaaatactcgacagtgatgaccagcag
cgactgattaaacgtctgataaaaagcctcaacttagacgacaagcgctggccggcaaaa
caagctcagtggtacatcaacggcaaaaaagacgaagggttacgggccgagcatatagaa
acttacgacccaaccgagcagacactgaaagaaatttaccagctgtaccaggaaagctgt
gatcgcgctggtttggtcgattttgccgaactgttgctaagggcgcatgagctgctgaga
aataaccgaatcgttcgggagcattatcaaaaccgctttcgtcatattttggtggacgag
tttcaggacaccaactccatccagtatgcctgggtgaggttgttagctggggcgcagaac
agcgtgaccattgtcggtgatgacgaccaatctatttatggctggcgtggcgccaaagtt
gagaacattcatcagttcttagaagactttgccggcgcacaaaccattcgtctggaacag
aactaccgttcaaccagtactattttgaaagcggcaaactccgtcatttctaataactcc
ggccgtttgggtaaagacttatggactgaggggaatgaaggcgagcccatcagcctgtat
gcaggctttaatgaaatggatgaggcgcgttacatcgtttcacaaattgaaggctggcga
gataaaggtaattcgctgcaagatgtcgccattttgtaccgaagtaatgcacagtcgcgt
attttagaagaggcgctactgcatgcccggttgccgtatcgcatttacgggggcttacgc
ttcttcgaacgtcaggaaattaaggacgcactggcctacttgagaattttaggtaatcgg
gatgacgacgctgcgcttgaacgtgtcattaatacccctgcccgcggcattggcgggcgt
accatggatattattcgtcaggcgtcgcgggagcgtgctgaatcactgtggaatgcggcg
aaatacatggtgaacgaaaagcagttagccgggcgcgcgcgaaatgcggtaggcagcttc
ctcgactttattgaagagctggatgatgaaaccgaagagttcagcttaggccgcttaagt
gatgaagtcatcaagaaaagcggcttaatggccatgtatgaagcagaaaaaggcgaaaaa
gcggagacccgggtcgaaaacttaaaagaactggttactgcctgtgagaactttgtactg
gatgacgccgaagaggatatgacgccacttaatgcatttctggcgcatgcagccttagaa
gcgggtgaagaacaagcggacgaatatcaggatgctgttcagctaatgaccttacacagc
gcaaaaggcttggaatttcccttggtgtttatgacgggcgtggaagaaggtatgtttccg
tcgcagcagtcgatggatgagcccggcaggctcgaagaagagcgtcgtctttgttacgtg
ggtatgactcgggcaatggaaaagttagtgcttacttatgcggagcagcgtcgcatttat
ggtcaggagctattccaccgaatcagtcggtttattgcggaaatcccacccgatactctg
catgaagtccgtgcgcaaaccagcgtagaaaagccgtcgagctacagccgttttaataac
gccgccagtcatgaagcctttgatcaaaccggttacacgctgggtcagcgggttcgccac
ccgaagtttggggaaggtactgtgcttaattacgaaggcacgggcccgcagtctcgtgtt
caaattaactttgataacgtggggagcaaatggctggtggttgcttacgctcgactggat
ccggttttctaa
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