Idiomarina sp. X4: CWC33_06235
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Entry
CWC33_06235 CDS
T05226
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idi02000
]
CWC33_06235
Transporters [BR:
idi02000
]
Other transporters
Pores ion channels [TC:
1
]
CWC33_06235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
MtrB_PioB
Phenol_MetA_deg
DUF2490
Motif
Other DBs
NCBI-ProteinID:
ATZ73320
LinkDB
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Position
1300717..1302732
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AA seq
671 aa
AA seq
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MNVFKNGLKLGVLSMAIFSALGTAYAQDGANDDREKRRHKHKDMEVMVVTASGVAQHIKK
APASISVIDKDELSQRFYKDLTDAMTDAPGVVVTGGGDRQDISLRGMGADYTLILVDGQR
QSSRETRPNSDGPGVEGAWTPPLAAIDRIEIIRGPMSSLYGSDAIGGVINIITRKTPDEW
RSEIRVDGTLQERTESGNSYQTNFYTAGSLIEDTLGLQLSAGYTRRLEDDIVDGFRDKTA
QDADMKLAYTPNRDHEILFEVGTAKQTIDASLGKTIEPLAPGEECGRRGCPESSSTVYDS
QSVSIAHNGQWGLVGARSYLKRDEYENEARLMTITNTDFQSHWNLPLFDDNSVNTGVSYF
KEELEDLTSNQISDRTRVEGSQWSVFAETAWPLFKGFDLTTGVRYDDDDIFGGHWSPRVY
GVYTLSRTTTIKGGVSTGFRAPDLRETTPDWGQVSRGGDVYGNPNLEAETSTNYELGLYT
DWSRHTSTSATVFYNQFDDKITRVACPATVCDAGPNQFGSMPTTRVNIDEAVTRGFELTF
NSRLSRHWSVKGNYTYTDSEQKSGEYAGEPLNQLPKHLIQTSLNWKPNKRWNSWLRVHYR
GKESQPTTGPSQSALVAPSYTLADFGVNYYVTRDLKLAAGIYNLLDKEIGVEEYGYVEDG
RRLWLSAAYSF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtttttaagaatggcttgaaactgggtgtactttcaatggctattttttctgcc
ttgggtaccgcttatgcacaggatggtgcaaacgacgatcgtgaaaagcggcgtcataaa
cacaaagacatggaagtgatggtggtgacggcctctggtgtcgcccagcatataaaaaag
gcaccggcttctatttccgttatcgataaagacgagttgtcacagcgcttctacaaagac
ttaaccgacgccatgacggatgcgccaggggttgtagtcaccggcggtggtgaccgtcag
gatatcagtctgcgggggatgggagccgactacaccttaattttggtggacggtcagcgt
cagagctccagagaaacccgtccaaacagcgacggtccgggtgtggaaggcgcctggacg
ccaccactggcggccatcgatcgcattgaaattattcgtggaccgatgtcgtcgctttac
ggctcggacgcaataggtggcgttattaacatcattacgcgaaaaacaccggacgaatgg
cgctctgaaattcgcgttgatggcacgttgcaggaacgaacggagtccggtaacagctac
caaacgaacttctatacggcaggttcactcatcgaagatactttgggacttcagttgtcg
gcaggatatacacggcgtcttgaagatgacattgtcgatggctttcgtgataaaaccgca
caagatgcagatatgaaactggcttatacgccaaatcgcgaccatgagattctgtttgaa
gttgggacggctaaacaaacgatagacgcttctttaggtaaaacgatagagccgctggcg
ccgggcgaagaatgcggtcggcgtgggtgtccagagtcttcaagcactgtgtacgatagt
cagtccgtatcgattgcccacaacggtcaatggggcttagtgggtgcacgcagctaccta
aaacgcgacgagtatgaaaacgaagcccgtttaatgaccattaccaataccgactttcaa
agccactggaatttaccactatttgatgacaattcagtcaataccggcgtttcctacttt
aaggaagagctggaagatttaaccagtaaccaaatcagtgaccgtacccgagttgaaggc
tcgcaatggtcggtatttgcagaaacggcctggccattgtttaaagggttcgacttaacc
accggcgttcgttatgacgacgatgacattttcggcggtcactggagcccacgtgtctac
ggtgtttataccttaagccggacaacaaccataaaaggtggggtttcaaccggcttccgg
gcgccagacctgcgcgaaaccacccctgactggggtcaggtcagccgaggtggcgatgtc
tacggcaacccaaatttagaagcagaaacgtcaacaaactatgagttgggtttgtatacc
gactggagtcgccatacctcaacctctgctactgttttttacaaccaatttgacgataaa
atcactcgcgttgcctgcccggcaacggtgtgtgatgccggaccgaatcagtttggctcc
atgccaacgactcgtgtgaatattgatgaagcggtgacccgagggtttgagttgacattc
aattcacgccttagccgccattggtcagttaaagggaactatacgtacaccgactctgaa
cagaaatcgggtgagtatgccggtgagcctctaaatcaattgcctaagcacttaatacaa
acgtcgttaaactggaagccgaataagcgctggaacagttggttacgtgtgcattatcgc
ggtaaagaaagccagccaacaacgggaccgtcacagagcgcattggttgcgccgtcctac
acactggcagacttcggtgtgaattattatgtgacacgagacttaaagttagcagcgggt
atttataacttactggacaaggaaattggcgtggaagagtacggctatgttgaagacggc
cgacgtctttggctatcggccgcctacagcttttag
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