Idiomarina sp. X4: CWC33_07185
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Entry
CWC33_07185 CDS
T05226
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
idi
Idiomarina sp. X4
Pathway
idi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CWC33_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
idi03019
]
CWC33_07185
03009 Ribosome biogenesis [BR:
idi03009
]
CWC33_07185
Messenger RNA biogenesis [BR:
idi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CWC33_07185
Ribosome biogenesis [BR:
idi03009
]
Eukaryotic type
Pre-60S particles
RNases
CWC33_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ATZ73498
LinkDB
All DBs
Position
1503163..1503714
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AA seq
183 aa
AA seq
DB search
MAEDDKKQRLIWIDLEMTGLVPEEHHIIEVATIITDAGLNTIAEGPVIAVHQPKKYLDRM
DAWNVKTHTGSGLVERVQKSQHNERTAAAATIEFLQQHIDAGVSPMCGNSICQDRRFLAR
HMPELEAFFHYRNLDVSTLKELAKRWQPEVADSFKKSGAHEALADIRESIDELKHYREHF
FSK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagacgataagaaacaacgcttaatctggatagacttggaaatgaccggcctg
gtgccggaagagcatcatattattgaggtagcgactattatcacggatgctggactcaat
acaattgccgaaggcccggtaattgcggttcatcaacccaagaaatatctcgatcgcatg
gacgcctggaacgtgaaaactcataccggctcagggttagtcgaacgtgtgcaaaaaagt
cagcataacgagcgcacagcagcggcagcaaccattgagtttttacagcagcatatcgac
gccggcgtatcgcctatgtgtggtaacagcatttgccaggatcgtcgttttttagcacgc
cacatgccggaacttgaagcgtttttccactaccgaaaccttgatgtcagcaccttgaaa
gaactggcaaaacgctggcagccagaagtagcggatagttttaaaaagtccggtgcccat
gaagctctggcagatattcgagagtctattgatgaattgaagcactacagagaacatttt
ttcagcaaataa
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