Idiomarina sp. X4: CWC33_07470
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Entry
CWC33_07470 CDS
T05226
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CWC33_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
idi03019
]
CWC33_07470
Enzymes [BR:
idi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CWC33_07470
Messenger RNA biogenesis [BR:
idi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CWC33_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
SIX1_SD
Motif
Other DBs
NCBI-ProteinID:
ATZ74569
LinkDB
All DBs
Position
complement(1559172..1560569)
Genome browser
AA seq
465 aa
AA seq
DB search
MKELAKRAFSSKDTSSNSRLPALKVIPRDKHPVSRNDISKNALKVLYRLHNSGFDAYLVG
GCVRDILLGIQPKDFDVTTNATPEQVKSLFRNCRLIGRRFRLAHVVFGKEIIEVATFRGH
HADEPDSKTAKKNQHAHSDEHGQLVRDNVYGTIEEDAERRDFTANALYYNIADFAIYDFA
NGVDDINKGVLRLIGDAETRYREDPVRMLRAVRFATKLNMQMDNAVREPINELASLLANI
PPARLFDEFLKMFMSGKATANFSLMMELGLFQQLFPILKGHLSDAQSPAYQMLLKAFKDT
DKRIAEDKRVTPAYLIAVLLWWPLLARKEQLENEGGLPPMDAINIAAADVVHRQSQRVSI
PKRFSLPAREIWQLQRRLQVTKGGRAMKALEHKRFRAAYDFMLLRAHAQPDEKKLAELAQ
FWTEAQNNPAKLKTGKSGAPTGKPRRRRRGPRKKKPQNNPDNGSA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ataaaagagttagcaaaacgcgctttctccagcaaggatacctccagcaacagtcgttta
ccggcgttgaaagttatcccaagagataaacaccccgtatcccggaacgacattagcaaa
aacgcacttaaagtcttgtaccgcttacataacagcggctttgacgcttacttagtgggc
ggctgtgtgcgtgatattttgttaggtattcaaccgaaagactttgatgtaaccaccaac
gcaacgcccgagcaggtgaagtcgctatttagaaactgccgtcttattggtcgtcgcttt
cgcctggcgcatgtcgtgtttggcaaagagattattgaagtcgctacgttccgcggacac
cacgcggacgaacctgattcaaaaacggccaagaaaaaccagcacgcacacagtgatgag
catggccagttagtgcgcgataacgtctatggcaccatagaagaagatgccgagcgccgc
gacttcactgcaaatgcgctgtattacaacattgccgactttgccatttatgactttgct
aacggcgtcgacgacatcaataagggtgttttgcgattaattggcgatgcggagacacgc
taccgcgaagatccggttagaatgctgcgtgcggtgcgttttgcgaccaagctcaacatg
caaatggataacgcagtccgcgaaccgattaatgagttggcttcgttgttagcgaacatt
ccgcctgcacgcctgtttgatgaatttttgaaaatgtttatgtcaggtaaagccacagca
aacttttcactgatgatggagctagggctcttccaacagctattcccaatactcaaaggg
catttaagtgatgctcagtcaccggcgtatcaaatgctgttgaaagcctttaaggatacg
gataaacgtattgctgaagacaaacgcgtaacgccggcatacctcattgctgtactgtta
tggtggccgcttctggctcgcaaagagcagctggaaaatgaaggcggcctgccaccgatg
gatgcaataaacattgcagctgccgatgtggtacacaggcagtctcagcgtgtttcgatt
cctaaacgcttcagtctacccgctcgtgaaatttggcagctgcaaagacgtttgcaagtc
acaaaaggtggtcgtgccatgaaagcgcttgagcacaaacgcttccgtgccgcttatgac
tttatgctgctacgtgcccacgcccagccagatgagaaaaagctggctgaactggcacag
ttctggacagaagctcagaataatccggcgaagctgaaaactggcaagtccggcgcacct
accggcaagcccagacgccgtcgtcgcgggccgcgtaagaagaagccacaaaacaatcca
gataatggctcagcataa
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