Idiomarina sp. X4: CWC33_08480
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Entry
CWC33_08480 CDS
T05226
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CWC33_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_08480
Enzymes [BR:
idi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CWC33_08480
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CWC33_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DDE_Tnp_4
RecJ_OB
Phosphatase
Motif
Other DBs
NCBI-ProteinID:
ATZ74579
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All DBs
Position
1770582..1771892
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AA seq
436 aa
AA seq
DB search
MVYSVSQLNGEIRQLLEQGFRQISLVGEISNFAAPGSGHWYFTLKDERSQVRCAMFRGAN
QRATMRPQNGSQVLVKAKVTLYEPRGDYQLIVEHLEDAGQGLLQQRYEQLKAKLGAEGLF
ASDRKRPLPEHIRKVGVLTSPTGAAIKDILAVMKRRDPSVEVIIYPTSVQGEAAVGQLQS
MAQTAFERNEVDVLLVSRGGGSLEDLWCFNDEGFARLLATAPMPIISAVGHEIDFTIADF
VADVRAPTPSAAAELVTQDQQQQLQRAQTLMQRLQRAQLRHVQRLKQQWQFLQTRLQQQH
PQRLLQQQSQLADELQARASRALTQQLMRQRQQHTHLSGRLKAVHPEKRLAQHQQQLTTL
QQRLPQAMTRLLKDKTARQGQLMQALNLVSPLNTLERGYAIVRKDNGTVVRRADDVASGE
QVGVLLADSSFTARRN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcggtcagtcagttaaatggtgagattcggcaattacttgagcagggtttc
cgccaaataagcctggtaggcgaaatttcaaattttgcggcgccgggttctgggcattgg
tatttcacgctgaaagatgaacgttcacaggtgcgctgtgccatgtttcgcggggctaat
cagcgggcgactatgcgtccacaaaatggctctcaagttttagtgaaagcaaaagtgacc
ctgtacgagcctcgcggtgactatcagcttattgtcgaacacctggaagacgccggacag
ggcttactgcaacagcgttacgagcagttaaaagcaaaactcggtgctgaaggcctgttt
gcgtcagaccgcaaacgaccgttacctgaacacattcgcaaagttggggtgctgacctca
ccaaccggggcggcaataaaagacatattagcggtgatgaaacggcgagaccccagcgtc
gaagtgattatctaccccacttcggttcagggagaagctgccgttggtcagctgcagtct
atggctcaaacggcttttgaacggaatgaagtcgatgtgctgctggtatcgcgaggtggt
ggctctcttgaagacctttggtgttttaatgatgaaggctttgctcgactgcttgcgacc
gcgccaatgccaattattagtgcggtgggtcacgaaattgactttaccatagctgacttt
gtggcagatgtccgtgcgccaacaccatctgccgcagcagagttggtcactcaagatcag
caacaacagttgcagcgggcgcaaaccctgatgcagcggttgcaacgggctcagctcagg
catgtccagcgccttaagcagcagtggcaatttctgcaaacccgattgcaacagcaacac
ccacaacgattgttgcaacagcagtcgcaactggcagacgaattgcaggcacgagcgagc
cgggcactgactcagcagctgatgcgtcagcgtcagcagcacacgcacctcagcgggcgt
ttaaaagccgtacacccggaaaaacggttggcacagcaccaacagcagctgacaacgctt
cagcaacgtttgccacaagccatgacgcgtttactgaaagacaaaacggctcggcagggg
cagttgatgcaggcactgaatttggtgagtccactgaatacgctggaacggggttatgcc
attgttcgtaaagacaatggcacggtggtgcgccgggccgatgatgttgccagcggcgaa
caagtgggtgtgctcctggccgacagttcattcacggcgaggcgcaattaa
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