Idiomarina sp. X4: CWC33_08595
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Entry
CWC33_08595 CDS
T05226
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid kinase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00540
Lipopolysaccharide biosynthesis
idi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CWC33_08595
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
idi01005
]
CWC33_08595
Enzymes [BR:
idi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CWC33_08595
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
CWC33_08595
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
CWC33_08595
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
CWC33_08595
Lipopolysaccharide biosynthesis proteins [BR:
idi01005
]
Lipid A
CWC33_08595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Kdo
RIO1
Pkinase
APH
TCAD9
CATASP
Motif
Other DBs
NCBI-ProteinID:
ATZ73752
LinkDB
All DBs
Position
1802515..1804500
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AA seq
661 aa
AA seq
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MMLWFYGLILRLVTPAVFVWLWLRGRKDHRYRSHWSERLALDTVSVDLQGCTIIHSVSVG
ETLAAKRLIEQFVAQFPDEKVVITCMTPTARALIQTHFGNQVTYRYWPLDTPGSAKRFVS
KLKPKTVWIMETELWPQMLNSLAQASVSVCLLNARLSKRSAAGYRRFHRLLKSVWQQLAL
VSVQNKETARRMRMLGVPTGRLFVDGNLKYDIELSQSDIAKAAQWIPSCEGRSIWLGSST
HPGEHEQLLAAHKRILEHEPDACLIIAPRHPEQFEVVAKLVQDNALRLARRSQNDTIPND
CHVFLADSMGEMMLWGQLASISFIGGSLIERGGHNPLEVIAAGSNVMSGKHVFNFPQVYG
ELAKAGAVNWVGNVDDIVNTINKLQQPAVMKQQHDAAKSVLKTHQGATQRVLARALEYTL
TGSGMIKTEQSPRGLIRYDSNIIETIEDKHFTAQYWQQQKAIAGNSTGRATVWFIQQGDL
GLLLRHYYRGGLVGKINKDRFLREPADKSRAIHEFDLLLKLREKGLPVPRPVAARMEKTG
VFSYKADILVEVIPGAVDVFRLLREKQLSAELWQTLGAVIKELHDAGVYHSDLNCHNLML
DDNDKAWIVDFDKCDFREEGDWKEANIQRLLRSLRKEKEKNDTFYWKESRDWPELLTGYR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttggttttacggattaatattacggctggtgactccagccgtttttgtctgg
ttatggttgcgcggccgaaaagaccaccgttatcgctcacactggtcagagcgactggcg
ctggacacagtcagtgttgacttgcagggttgtacgatcattcacagcgtgtcggttggg
gaaacgctggcagcgaaacggttaattgagcaatttgtcgcgcaattccctgacgaaaaa
gtcgtaataacctgcatgacgccgaccgcacgcgcacttattcagacgcattttggtaac
caagtgacgtatcgttactggccattggatactccggggtctgcaaagcgctttgtttca
aagctgaagcctaaaaccgtctggataatggagactgagctttggccgcaaatgctcaac
tctctggctcaagcgagtgtatcggtttgtttattgaatgcgcggctttcaaaacgctct
gcggctggatatcgtcgttttcaccgattactgaagtcggtttggcagcagttagccctc
gtttcggtgcaaaataaagaaaccgctcgacgcatgagaatgttgggcgtgccgacaggt
cgcttatttgtggatggtaacctcaagtacgacatcgaactcagtcagagcgatatagcc
aaagcggctcaatggataccgagttgtgaaggccgctcaatttggttgggcagcagcact
cacccgggtgagcatgaacaactgctagctgctcataaacgtattcttgagcatgagccc
gacgcttgtcttattattgcgccaagacatcccgaacagtttgaggtcgttgccaaatta
gttcaggataacgccctccgcttggcgcggcggagtcagaacgacacaattcccaatgat
tgtcatgtttttttggcggacagtatgggcgaaatgatgctttgggggcagttggcatct
ataagctttattggtggcagtttaattgaacgaggcggacacaacccccttgaagttatt
gctgctggctccaatgttatgtctggtaaacacgtttttaacttcccgcaagtttatggg
gagctggcaaaagctggcgctgttaattgggttggaaacgtagacgatatcgtcaatacg
ataaacaagctgcagcagccagctgtcatgaaacaacaacatgacgctgctaaaagtgtc
ttaaagacgcatcagggtgcaacgcaacgcgtgttagcgagagcactggaatatactctg
acaggaagcggtatgataaagacagagcagagtccccgtgggcttattcgctacgatagc
aatattattgaaaccattgaagacaagcatttcacggcgcagtattggcaacaacaaaaa
gccattgcgggtaactcaactggccgggcaacggtctggttcattcagcagggcgactta
ggcttgttgctgcgccattactaccgaggtggtttggttgggaaaatcaataaagatcgc
tttttaagagagccggctgacaaaagcagagcgattcacgaatttgatttgttattgaag
ctgcgtgagaaagggcttccggttccgagaccggttgcggcacgcatggaaaaaaccggt
gtatttagttacaaagcagatattcttgtcgaagtcattcccggagcagtggatgtcttt
cgcctactgcgcgaaaaacagttgtcagcagagctttggcaaacgcttggtgccgtcata
aaggagctgcacgacgctggcgtctatcattcagacctgaactgccataacttgatgtta
gatgacaacgacaaagcgtggatagtggattttgataaatgtgactttcgtgaagagggt
gactggaaggaagcgaatatccaacgcctgttgcgctcattgagaaaagagaaagaaaag
aacgacacgttttattggaaagagtctcgcgattggcctgaattattgaccggctatcgc
cgttag
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