Idiomarina sp. X4: CWC33_09255
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Entry
CWC33_09255 CDS
T05226
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00260
Glycine, serine and threonine metabolism
idi00460
Cyanoamino acid metabolism
idi00630
Glyoxylate and dicarboxylate metabolism
idi00670
One carbon pool by folate
idi00680
Methane metabolism
idi01100
Metabolic pathways
idi01110
Biosynthesis of secondary metabolites
idi01120
Microbial metabolism in diverse environments
idi01200
Carbon metabolism
idi01230
Biosynthesis of amino acids
idi01240
Biosynthesis of cofactors
idi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CWC33_09255 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CWC33_09255 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CWC33_09255 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CWC33_09255 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CWC33_09255 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CWC33_09255 (glyA)
Enzymes [BR:
idi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CWC33_09255 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ATZ73871
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Position
1929401..1930657
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AA seq
418 aa
AA seq
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MLKSEMNIADFDADLWQAMQGEVERQEQHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
HKRYYGGCEFVDKVEDLAIERAKELFGAKYANVQPHSGSQANTAAFMALMEAGDTFLGMS
LAHGGHLTHGSGVNFSGKLYNAVSYGLDESTGEIDYAEVEKLALEHKPKVIVAGFSAYSG
IVDWKKFREIADKVDAYLMVDMAHVAGLIAAGEYPNPVPYAHVVTTTTHKTLAGPRGGLI
ISGSDDEKLHKKLNSAVFPGNQGGPLCHVIAGKAVAFQEALQPEFKAYQQQVLKNANVMV
KAMQSRGYKIVSNGTQNHLFLVDLIDKDITGKDADAALGDAFITVNKNAVPNDPRSPFVT
SGLRLGTPAITRRGFKETEAEQVANWICDVLDDISNESKISEVREQVKALCANFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatctgagatgaacattgccgactttgatgcggacttatggcaagcgatgcaa
ggcgaagttgagcgtcaggaacaacacatagagctgattgcgtcagaaaactacaccagt
ccgcgagtcatgcaggcgcaaggttctcagttaaccaacaagtacgcagaaggctatcca
cataagcgttattatggtggctgtgagtttgtcgataaggttgaagacttagccattgag
cgtgccaaagagttattcggtgcaaaatatgcaaacgtacagccacattctggttcgcaa
gcaaatacggctgcatttatggcgctgatggaagccggagacactttccttggtatgagt
ttggcgcacggtggtcacttaactcacggttccggagttaacttctcaggaaagctttat
aacgccgtttcgtatggcctggacgaatccactggtgaaattgactatgccgaagttgaa
aaactggcgctggaacacaaaccgaaagtgatcgttgcgggcttctcagcctattctggt
atcgttgactggaaaaaattccgtgaaattgcggataaagttgatgcttatttaatggtc
gatatggcgcacgtagcgggtttgattgctgcaggtgaatacccgaacccagtgccttac
gcacacgttgttactacgactacgcataaaacgctggcgggcccacgtggtggtttgatt
atttccggtagcgatgatgaaaagctgcataaaaaattaaacagtgccgtattcccgggt
aatcaaggcggtccgttatgccatgttattgccggtaaagcggtcgctttccaggaagca
ttacagccggaatttaaagcttaccagcaacaagtgctaaaaaatgcgaacgtaatggtt
aaagcaatgcagtctcgcggctataagattgtttctaatggtacgcagaatcacttattc
ctggttgatctaatcgataaagacatcacgggtaaagacgcagatgctgctttaggtgat
gcatttattacggttaacaagaatgcggttcctaatgatccgcgttctccttttgtgacc
tctggcttgcgtttaggcacaccggctattacccgccgtggctttaaagaaactgaagct
gaacaagttgctaactggatctgtgacgttctggacgatatctcgaacgagagcaaaatt
tcagaagtacgtgaacaagtaaaagcgttatgcgctaactttccggtatacggataa
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