Idiomarina sp. X4: CWC33_09365
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Entry
CWC33_09365 CDS
T05226
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03030
DNA replication
idi03430
Mismatch repair
idi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC33_09365
03430 Mismatch repair
CWC33_09365
03440 Homologous recombination
CWC33_09365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idi03032
]
CWC33_09365
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_09365
Enzymes [BR:
idi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC33_09365
DNA replication proteins [BR:
idi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC33_09365
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC33_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_2
AAA_18
AAA_14
AAA_30
PIF1
Rad17
AAA_19
TsaE
AAA_7
nSTAND3
Mg_chelatase
SKI
AAA_assoc_2
VapE-like_dom
Herpes_Helicase
CDC37_M
CbiA
AAA_28
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ATZ73890
LinkDB
All DBs
Position
1947413..1949461
Genome browser
AA seq
682 aa
AA seq
DB search
MSYQVLARKWRPSQFSEVVGQQHVLKPLEHALLKQRLHHAYLFSGTRGVGKTTIARILAK
ALNCDTGVTSTPCSQCSACQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTRGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALSK
EDIAGQLKYVLEQESISADSESLSLLARSANGSMRDALSLTDQAIAQGHGEVLLDSVRQM
LGNVPTADIAGLLSDVLNNDAVSLMQRVDNMVAVVPDLSSVLVEMQSLLHQLALMQQLPE
SQQAFDNVDTLQPLLRQMPAELIQVFYRIVLEGRREQPYAVDARSGLEMTLLRLLAFRPK
TVTSKDNSSNEPHLSEKPLEKASSDLTASNEQNEMRAPTTSERLVESDAGLNVQYNNEVN
EDLASFSHNEELGSELPDVDTYRQPPEPAQDEQTNSQTDTPVSGLDDLLQMRQDLMQKKK
PGEVASKGTFEASSHQESTTQPKAAVPTPETELESNWVELSEQPHDNAARNDTSQPVLTA
EHNYDYPEITDDIKEAADIDRWSAMIAGMDISGLARQVLLNSELQQSGDDNWTILVNSDQ
QSLLNSATEQAVRESLQEVLGQHTRVSFSIGTPTQPTPLMLQQRINEYRHKRALERLEKD
NGVMELKKRFGAQIDEESVQAL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttctggcaagaaagtggcgaccgtcccagttttctgaggtggttggg
caacagcatgtattgaaaccgttagaacatgcactgctgaagcaaaggcttcatcacgct
tacctcttttccggaactcgcggcgtcggaaaaaccacgatagcacggattttagccaaa
gcattgaactgtgatactggtgttacctcaaccccatgtagccaatgttcagcctgccag
gaaattgatcagggacgctttgtcgacttattagaaattgacgcggcgtcgcgtacaaaa
gtagaagacacgcgagagcttcttgataacgtgcagtaccggccaacgcgcggacgatat
aaagtctaccttattgacgaggttcacatgttgtcgcgtcatagcttcaacgccctattg
aagacgctcgaggaaccgcctgaacatgttaagtttttgctggcgacaactgatccacaa
aagttgccggtaaccgtgctgtctcgttgcttacaattcaatttaaaagcactgtcaaag
gaagacattgctggtcagctgaaatatgttttagagcaggaaagtatttcggcggattcg
gaatcgctttcgttgctggcaagatccgctaatggcagtatgcgcgacgcgctcagccta
accgatcaagctattgctcaggggcatggtgaagtgttgttagacagtgttcggcaaatg
ttgggcaatgtaccgaccgccgatattgctggcttattgagcgatgtattgaataatgac
gccgtttctttaatgcagcgtgtcgataacatggtcgctgtggttcctgatttaagctca
gtactggttgaaatgcagagcctgttgcatcaattggccttgatgcagcaactgccggaa
tcacagcaagcctttgataatgttgataccttgcaaccgctgctgcgacaaatgcccgct
gagttgatacaagtattctatcgaattgtgttggaagggcggcgagagcagccttatgct
gtggatgccagaagtggtcttgaaatgacgttactgcgtttattggcgtttcgcccaaaa
acggtgacctcaaaggataactcatccaacgaacctcatttatctgaaaaacctttagaa
aaggcatcgtcagaccttaccgcatcaaatgaacagaacgagatgagagcgccaacaacg
tcggagcgcttagtagagtcggatgcgggactaaatgtacaatacaacaatgaagtaaat
gaagaccttgcgagcttttcacacaatgaagagctaggcagcgaactcccggatgttgat
acctaccggcaaccacctgaaccagcgcaagatgagcagactaactctcaaactgacact
ccggtatccggcttagatgatttgttgcaaatgcggcaagatttaatgcaaaaaaaaaag
cccggtgaagtagcgtcgaaaggcacttttgaagcatcaagtcatcaagagtcgacgact
cagcctaaagccgcagtgccaacacctgagacagagttggaatcaaactgggtagagctt
tctgaacaaccacatgacaacgctgcgcgcaatgatacatcgcagccggtgcttaccgca
gagcacaactacgactatccggaaatcaccgacgacataaaagaggcggcggatattgat
cgctggagcgcaatgatagcgggtatggacatttccggcttggcgcgacaggtattactg
aactcggagttacaacaaagtggcgatgataattggacaattctggttaacagtgatcaa
cagtcactactaaatagcgcaaccgagcaggctgtaagggagtctttgcaagaagttttg
ggacaacatactagggtgtctttttcgataggaacgccgacacagcccacgccacttatg
ttgcagcaacgtattaatgaatacagacataagcgcgctctagaacgtttagaaaaagat
aatggcgtgatggagttgaaaaaacgctttggcgcacaaattgatgaagaatcggtgcaa
gcgctttaa
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