Idiomarina sp. X4: CWC33_10120
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Entry
CWC33_10120 CDS
T05226
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
idi
Idiomarina sp. X4
Pathway
idi03030
DNA replication
idi03430
Mismatch repair
idi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWC33_10120
03430 Mismatch repair
CWC33_10120
03440 Homologous recombination
CWC33_10120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
idi03032
]
CWC33_10120
03400 DNA repair and recombination proteins [BR:
idi03400
]
CWC33_10120
Enzymes [BR:
idi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWC33_10120
DNA replication proteins [BR:
idi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWC33_10120
DNA repair and recombination proteins [BR:
idi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWC33_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
SSB
Motif
Other DBs
NCBI-ProteinID:
ATZ74022
LinkDB
All DBs
Position
2090457..2093933
Genome browser
AA seq
1158 aa
AA seq
DB search
MTAPNFIHLRIHSDFSMVDGLAKVGPICDAVADAGMPALAITDQMNFCGLVRYYGTAHKL
GLKPIIGCDFWVQHSYPEGEIFRLTALAMDNDGYQQITQLMSKAYLRGHIADKPVIDKDW
LKEHNQGIILLSGAREGDIGHALLRNDDKELDAALDFYQEYFPDRFYLELVRTGRPKEED
YLHKAVKLAGETQLPVVATNEVVFLKEENFDAHEIRVSIHDGYQLEDRRRPKKYSPQQYL
KTAEEMAELFSDIPEALENTVEIAKRCNVTVRLGEYFLPKFPTGDMTTEDYLVKVSEEGL
EERLAFLFPDEEERAAKRPEYDERLVEELNVINGMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAD
LYGREAVSQIITFGTMAAKAAIRDVGRVLGHPYGFVDRISKLVPGDPGMTLEKAFEIEPQ
LGELYDQDGEVKAIIDMARILEGVTRNAGKHAGGVVISPTTITDFSPLYCDDEGKNPVTQ
FDKNDVESAGLVKFDFLGLRTLTIIQWAVDMVNARKEKAGEELIDITAIDLTDPACFKLL
KKAETTAVFQLESRGMKELIKKLLPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVKYQHDSLQPILEPTYGVILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEM
AKQREIFREGAAKNNIDPELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLADECERMGLELLPPDVNKGAYKFTVDEQQRVVYGIGAIKG
VGEAPIESIIQARNEGGPFKDLFDFCCRVNLKKMNKRVLERLIRAGAMDNLGPHRAALMA
TLEKAIRQAEQHLQAEQIGQSDMFGVLTTEPEAVEQEFVQVRHWPEAVWLEGERETLGLY
LTGHPINRFRSELKHYVSNTLSNVGPTPKDQSVAIAGLVIDIRVLTNKRGQRFAIVTLDD
KTARMDVRLFSNEYESYQELLEKDRILWVKGEVRFDNFSNSNTMTAREVMAIEQARESYL
RSLSITLTEDALENGVAGKLETVLAPYAKGTCPIKLRYNSSYAKAELSVEANWYVTPSDE
LIDELQNLLGNQQVSLEF
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaccaaactttatccatttacgcattcacagcgacttctccatggtcgatggc
ttagccaaagtcggcccgatatgtgatgccgtagctgacgccggtatgccggcattagcg
ataaccgatcaaatgaatttttgtggtctggttcgttattacggtacggcgcataaatta
ggattaaaacctattatcgggtgtgacttttgggtacagcacagctatccggaaggtgag
atatttcgtttgacggcattggcaatggataacgacggttatcagcaaattacacagtta
atgtcgaaagcttatttgcgaggacacatagcggataaacccgttattgataaagactgg
ctaaaagagcacaaccaggggattattttgctctccggcgctcgtgaaggtgatatcggc
catgcattattgagaaacgacgataaagaacttgatgcggcattggacttttatcaagag
tattttcctgatcgcttttatcttgaattggtgcgaactggacgtcctaaagaagaagac
tacctgcacaaagcggtaaagttagctggtgaaacacagctacccgtcgttgcgaccaac
gaagtcgtttttctgaaggaagaaaactttgacgcccatgagattcgtgtatctattcat
gacggttatcagcttgaagatcgccgccgccccaagaagtattcgccgcaacagtatcta
aaaacggccgaagaaatggcggagctgttctccgatattcctgaagcgttggaaaatacc
gttgaaatcgctaagcgatgtaatgtgacggtccgtttaggcgaatactttctgccgaaa
tttccgaccggagatatgacgacggaagactacttggtcaaagtgtctgaagaaggttta
gaagagcgtctcgcgtttctctttcctgacgaggaagaacgcgcggctaaacgtccagaa
tatgatgagcgtctagtagaagagcttaacgtcattaatgggatgggcttcccgggctac
ttccttatcgttatggagttcatccagtggagtaaagacaatggcatacccgttggtccg
gggcgagggtcgggtgcggggtcgttagttgcttacgcactgaaaattaccgatttggat
ccgctcgagtttgacctgcttttcgaacggtttctgaaccctgaacgggtctctatgccg
gactttgatgtggacttctgtatggatcgtcgtgatgaggttattgaccacgttgccgat
ttgtacggtcgcgaagcggtatcgcagatcattacgtttggcaccatggctgcgaaagcc
gcaatacgtgatgtagggcgtgtcctgggacacccgtatggctttgttgatcgcatatcg
aagttagtgcccggtgacccggggatgacgctggagaaggcatttgaaatagagcctcag
ctgggagaattgtacgatcaggacggtgaggtcaaagccattattgatatggccaggatt
ctagagggtgtcacacgtaatgccggtaaacacgccggtggcgtggttatttcgcctacc
actattaccgacttctcaccgctgtattgtgacgatgaaggcaagaacccggtcacccag
tttgataaaaacgatgttgaatcggccggcttggtcaagtttgactttttaggcttgcga
acactgaccattattcagtgggccgtcgatatggtaaatgcccgcaaggagaaagcaggc
gaagagcttatcgatatcaccgctatcgatttgaccgatccggcatgtttcaaattactt
aaaaaggccgaaacaaccgccgttttccagctggagtcgcgcggcatgaaggagctaatt
aagaagcttttgcctgactcttttgaagacattatcgcattggttgctctattcagaccg
ggaccgttgcagtcgggtatggtcgataacttcattgaccgaaagcatggtcgtgaagaa
atctcttatccggatgttaagtatcagcatgacagcttgcagccgattctcgaaccgaca
tacggcgttattttgtaccaagagcaagttatgcaaattgcacaggtactggcgggctat
actctgggtggcgctgatttgttgcgtcgagctatgggtaagaaaaagcccgaggaaatg
gcaaagcagcgcgagattttccgggaaggagcagcgaagaataatattgaccctgaattg
gcgatgaaaatcttcgatttggtagagaagttcgccggttatgggtttaataaatcgcac
tcggccgcttatgccttagtgtcgtatcaaacgctgtggatgaagactcattatccggca
gagtttatggctgcggtgatgtcagcggatatggataacaccgataaaattgttacgctg
gcggatgagtgtgagcgaatgggtcttgaattattgccgccagacgtcaataagggcgcc
tataagtttactgttgatgaacaacagcgtgttgtttatggcattggggctattaaaggt
gttggcgaagcgccgattgagtctattattcaagctagaaatgaaggtggtccgttcaaa
gatttgttcgacttctgctgtcgggtgaatttgaaaaaaatgaataagcgggttctggag
cggctaatacgagcaggtgctatggataatttaggaccacaccgcgcggcgcttatggcg
acgctggaaaaagccattcgccaggcagagcagcatttgcaggcagagcaaattggtcag
tccgatatgtttggtgtgctgactaccgagccggaagccgttgagcaggaatttgtgcaa
gtgcgtcactggccggaggccgtgtggctggaaggtgaacgggagactcttgggctttac
ctcaccggacaccccattaaccgctttagaagtgagttgaaacactatgtgtcaaatact
ctgtctaatgtcggtcctacaccaaaagaccaaagtgttgctattgcgggactcgtgata
gatattcgcgtgctgacaaacaaacggggccaacgttttgctatagtaacgttagatgac
aagacggcgcgcatggatgtacgattattcagcaatgaatacgaaagttatcaagaattg
ctcgaaaaagaccgaattttgtgggtaaaaggtgaggtcagatttgataactttagtaat
agcaatacaatgaccgctagagaagtgatggctatcgagcaagcgcgtgagagttattta
cgcagtttgtcgattacgctgacggaagatgcacttgaaaatggtgtggcaggtaagctg
gagacagtgctggcgccttatgcgaaaggaacctgcccaataaagcttcgttataactcg
tcgtatgcgaaggcagaattgtcagtggaagcgaattggtatgtgacgccatcggatgaa
ttaatagacgaattacagaacttgctggggaatcagcaggtttcactcgaattttaa
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